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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3301 A_BomaMG_comp13405_c0_seq1
755bp
FPKM:9.68 TPM:8.97
3302 A_BomaMG_comp13406_c0_seq1
1087bp
PREDICTED:_ATP_synthase_subunit_s-like_protein_[Papilio_polytes]
FPKM:6.62 TPM:6.13
3303 A_BomaMG_comp13408_c0_seq1
1194bp
glutathione_S-transferase_omega_4_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0004734 F pyrimidodiazepine synthase activity
GO:0005737 C cytoplasm
GO:0006726 P eye pigment biosynthetic process
GO:0006728 P pteridine biosynthetic process
GO:0006749 P glutathione metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016782 F transferase activity, transferring sulphur-containing groups
GO:0042803 F protein homodimerization activity
GO:0045174 F glutathione dehydrogenase (ascorbate) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:24.83 TPM:22.99
3304 A_BomaMG_comp13409_c0_seq1
2674bp
PREDICTED:_5'-AMP-activated_protein_kinase_subunit_gamma-2-like_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004679 F AMP-activated protein kinase activity
GO:0004862 F cAMP-dependent protein kinase inhibitor activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005977 P glycogen metabolic process
GO:0006110 P regulation of glycolytic process
GO:0006468 P protein phosphorylation
GO:0006469 P negative regulation of protein kinase activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007005 P mitochondrion organization
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0008607 F phosphorylase kinase regulator activity
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0016208 F AMP binding
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0031588 C nucleotide-activated protein kinase complex
GO:0032147 P activation of protein kinase activity
GO:0035556 P intracellular signal transduction
GO:0043531 F ADP binding
GO:0045860 P positive regulation of protein kinase activity
GO:0050790 P regulation of catalytic activity
GO:0061024 P membrane organization
GO:0071901 P negative regulation of protein serine/threonine kinase activity
FPKM:6.72 TPM:6.22
3305 A_BomaMG_comp1340_c0_seq1
295bp
FPKM:0.88 TPM:0.82
3306 A_BomaMG_comp13411_c0_seq1
503bp
FPKM:6.85 TPM:6.35
3307 A_BomaMG_comp13412_c0_seq1
1739bp
PREDICTED:_striatin-3_isoform_X1_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0007626 P locomotory behavior
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016358 P dendrite development
GO:0019904 F protein domain specific binding
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0043234 C protein-containing complex
GO:0045211 C postsynaptic membrane
GO:0048306 F calcium-dependent protein binding
FPKM:7.04 TPM:6.52
3308 A_BomaMG_comp134131_c0_seq1
331bp
phosphoglycerol_transferase_[Paenibacillus_sp._32O-W]
FPKM:1.58 TPM:1.46
3309 A_BomaMG_comp13414_c0_seq1
1855bp
PREDICTED:_uncharacterized_protein_F21D5.5_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000718 P nucleotide-excision repair, DNA damage removal
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0008152 P metabolic process
GO:0009314 P response to radiation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0017076 F purine nucleotide binding
GO:0019201 F nucleoside monophosphate kinase activity
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0046403 F polynucleotide 3'-phosphatase activity
GO:0046404 F polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0046939 P nucleotide phosphorylation
GO:0051973 P positive regulation of telomerase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0098504 P obsolete DNA 3' dephosphorylation involved in DNA repair
GO:0098506 P polynucleotide 3' dephosphorylation
GO:1904355 P positive regulation of telomere capping
FPKM:7.20 TPM:6.66
3310 A_BomaMG_comp13415_c0_seq1
463bp
PREDICTED:_chromatin_target_of_PRMT1_protein-like_[Amyelois_transitella]
GO:0000346 C transcription export complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0008284 P positive regulation of cell population proliferation
GO:0008327 F methyl-CpG binding
GO:0016607 C nuclear speck
GO:0031062 P positive regulation of histone methylation
GO:0032781 P positive regulation of ATP-dependent activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0051096 P positive regulation of helicase activity
FPKM:5.30 TPM:4.91
3311 A_BomaMG_comp13416_c0_seq1
284bp
RDD_domain-containing_protein_[Sulfurimonas_autotrophica]
FPKM:2.98 TPM:2.76
3312 A_BomaMG_comp13416_c0_seq2
275bp
RDD_domain-containing_protein_[Sulfurimonas_autotrophica]
FPKM:5.58 TPM:5.17
3313 A_BomaMG_comp13417_c0_seq1
673bp
PREDICTED:_chromatin_target_of_PRMT1_protein-like_[Amyelois_transitella]
FPKM:8.13 TPM:7.53
3314 A_BomaMG_comp13419_c0_seq1
1093bp
PREDICTED:_2-methoxy-6-polyprenyl-1,4-benzoquinol_methylase,_mitochondrial_[Plutella_xylostella]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043334 F 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
GO:0102005 F 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
FPKM:8.39 TPM:7.77
3315 A_BomaMG_comp1341_c0_seq1
355bp
FPKM:1.56 TPM:1.44
3316 A_BomaMG_comp13420_c0_seq1
460bp
PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
FPKM:10.71 TPM:9.92
3317 A_BomaMG_comp134218_c0_seq1
281bp
FPKM:3.33 TPM:3.09
3318 A_BomaMG_comp13424_c0_seq1
1166bp
PREDICTED:_ubiquitin-protein_ligase_E3A_[Amyelois_transitella]
GO:0000502 C proteasome complex
GO:0001541 P ovarian follicle development
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007420 P brain development
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031398 P positive regulation of protein ubiquitination
GO:0035037 P sperm entry
GO:0042752 P regulation of circadian rhythm
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051865 P protein autoubiquitination
GO:0060736 P prostate gland growth
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:2000058 P regulation of ubiquitin-dependent protein catabolic process
FPKM:6.91 TPM:6.40
3319 A_BomaMG_comp13426_c0_seq1
220bp
heavy_metal_response_regulator_[Achromobacter_sp._2789STDY5608615]
FPKM:1.45 TPM:1.34
3320 A_BomaMG_comp13426_c0_seq2
473bp
ETC_complex_subunit_I_[Sphingomonas_sp._UNC305MFCol5.2]
FPKM:8.26 TPM:7.65
3321 A_BomaMG_comp13427_c0_seq1
375bp
PREDICTED:_probable_2-aminoethanethiol_dioxygenase_[Elaeis_guineensis]
FPKM:10.33 TPM:9.56
3322 A_BomaMG_comp13428_c0_seq1
532bp
PREDICTED:_U6_snRNA-associated_Sm-like_protein_LSm5_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
FPKM:35.39 TPM:32.77
3323 A_BomaMG_comp134293_c0_seq1
610bp
PREDICTED:_max-binding_protein_MNT-like_[Bombyx_mori]
FPKM:1.98 TPM:1.83
3324 A_BomaMG_comp1342_c0_seq1
416bp
DNA-formamidopyrimidine_glycosylase_[Acidovorax_sp._Leaf160]
FPKM:1.16 TPM:1.07
3325 A_BomaMG_comp134308_c0_seq1
279bp
FPKM:3.06 TPM:2.83
3326 A_BomaMG_comp13430_c0_seq1
802bp
PREDICTED:_ran-binding_protein_3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0015031 P protein transport
GO:0046907 P intracellular transport
FPKM:8.95 TPM:8.28
3327 A_BomaMG_comp13431_c0_seq1
888bp
hypothetical_protein_KGM_15998_[Danaus_plexippus]
FPKM:5.94 TPM:5.50
3328 A_BomaMG_comp13433_c0_seq1
1068bp
PREDICTED:_deoxyuridine_5'-triphosphate_nucleotidohydrolase_[Papilio_polytes]
GO:0000287 F magnesium ion binding
GO:0001889 P liver development
GO:0004170 F dUTP diphosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006226 P dUMP biosynthetic process
GO:0009117 P nucleotide metabolic process
GO:0014070 P response to organic cyclic compound
GO:0016787 F hydrolase activity
GO:0030547 F signaling receptor inhibitor activity
GO:0032556 F pyrimidine deoxyribonucleotide binding
GO:0042975 F peroxisome proliferator activated receptor binding
GO:0043497 P regulation of protein heterodimerization activity
GO:0046080 P dUTP metabolic process
GO:0046081 P dUTP catabolic process
GO:0046872 F metal ion binding
GO:0070207 P protein homotrimerization
GO:2000272 P negative regulation of signaling receptor activity
FPKM:5.42 TPM:5.02
3329 A_BomaMG_comp13436_c0_seq1
1666bp
PREDICTED:_transportin-3-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
GO:0035048 P obsolete splicing factor protein import into nucleus
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
FPKM:6.38 TPM:5.91
3330 A_BomaMG_comp134370_c0_seq1
268bp
FPKM:1.52 TPM:1.40
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