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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3331 A_BomaMG_comp13437_c0_seq1
364bp
ATP/GTP-binding_protein_[Microbacterium_sp._B19]
FPKM:5.20 TPM:4.81
3332 A_BomaMG_comp134398_c0_seq1
1997bp
PREDICTED:_DNA_replication_factor_Cdt1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
FPKM:1.73 TPM:1.60
3333 A_BomaMG_comp13439_c0_seq1
460bp
FPKM:1.58 TPM:1.47
3334 A_BomaMG_comp134418_c0_seq1
1051bp
Lambda-crystallin-like_[Papilio_xuthus]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006631 P fatty acid metabolic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0050104 F L-gulonate 3-dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070403 F NAD+ binding
FPKM:2.18 TPM:2.02
3335 A_BomaMG_comp13441_c0_seq1
497bp
PREDICTED:_uncharacterized_protein_LOC101746312_isoform_X2_[Bombyx_mori]
GO:0002028 P regulation of sodium ion transport
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.61 TPM:1.49
3336 A_BomaMG_comp13443_c0_seq1
363bp
FPKM:1.68 TPM:1.55
3337 A_BomaMG_comp13444_c0_seq1
331bp
alpha/beta_hydrolase_fold_protein_[Fibrobacter_succinogenes]
FPKM:1.58 TPM:1.46
3338 A_BomaMG_comp13445_c0_seq1
370bp
FPKM:2.16 TPM:2.00
3339 A_BomaMG_comp13446_c0_seq1
329bp
FPKM:2.06 TPM:1.91
3340 A_BomaMG_comp13449_c0_seq1
417bp
FPKM:0.86 TPM:0.80
3341 A_BomaMG_comp13449_c1_seq1
410bp
cell_division_protein_FtsH_[Arthrobacter_sp._H41]
FPKM:0.89 TPM:0.82
3342 A_BomaMG_comp1344_c0_seq1
203bp
hypothetical_protein_Slin_1476_[Spirosoma_linguale_DSM_74]
FPKM:2.02 TPM:1.87
3343 A_BomaMG_comp13450_c0_seq1
543bp
PREDICTED:_ancient_ubiquitous_protein_1_[Tribolium_castaneum]
FPKM:5.34 TPM:4.95
3344 A_BomaMG_comp13451_c0_seq1
226bp
hypothetical_protein_HETIRDRAFT_390312_[Heterobasidion_irregulare_TC_32-1]
FPKM:5.23 TPM:4.84
3345 A_BomaMG_comp13452_c0_seq1
958bp
PREDICTED:_CTP_synthase_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003883 F CTP synthase activity
GO:0005524 F ATP binding
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0016874 F ligase activity
GO:0044210 P 'de novo' CTP biosynthetic process
FPKM:1.18 TPM:1.09
3346 A_BomaMG_comp13452_c1_seq1
484bp
CTP_synthase_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003883 F CTP synthase activity
GO:0005524 F ATP binding
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0016874 F ligase activity
GO:0044210 P 'de novo' CTP biosynthetic process
FPKM:1.12 TPM:1.04
3347 A_BomaMG_comp13453_c0_seq1
264bp
PREDICTED:_casein_kinase_I_alpha_isoform_X1_[Bombyx_mori]
FPKM:3.16 TPM:2.93
3348 A_BomaMG_comp134553_c0_seq1
295bp
FPKM:2.36 TPM:2.18
3349 A_BomaMG_comp134554_c0_seq1
294bp
glutamate_transporter_[Bombyx_mori]
FPKM:2.08 TPM:1.93
3350 A_BomaMG_comp13455_c0_seq1
850bp
PREDICTED:_zinc_finger_protein_Xfin-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.67 TPM:1.55
3351 A_BomaMG_comp13456_c0_seq1
447bp
FPKM:3.96 TPM:3.67
3352 A_BomaMG_comp13458_c0_seq1
383bp
MULTISPECIES:_hypothetical_protein_[Streptomyces]
FPKM:2.19 TPM:2.02
3353 A_BomaMG_comp13459_c0_seq1
249bp
NADPH_oxidoreductase_[Bombyx_mori]
FPKM:1.88 TPM:1.75
3354 A_BomaMG_comp1345_c0_seq1
290bp
transposase,_partial_[Cadra_cautella]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:1.54 TPM:1.42
3355 A_BomaMG_comp13460_c0_seq1
608bp
PREDICTED:_PIN2/TERF1-interacting_telomerase_inhibitor_1_[Plutella_xylostella]
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005819 C spindle
GO:0007004 P telomere maintenance via telomerase
GO:0007080 P mitotic metaphase plate congression
GO:0010521 F telomerase inhibitor activity
GO:0031397 P negative regulation of protein ubiquitination
GO:0031647 P regulation of protein stability
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0043231 C intracellular membrane-bounded organelle
GO:0051974 P negative regulation of telomerase activity
GO:0070034 F telomerase RNA binding
GO:0070198 P protein localization to chromosome, telomeric region
GO:1902570 P protein localization to nucleolus
GO:1904744 P positive regulation of telomeric DNA binding
GO:1904751 P positive regulation of protein localization to nucleolus
FPKM:2.70 TPM:2.50
3356 A_BomaMG_comp13460_c1_seq1
345bp
FPKM:1.45 TPM:1.34
3357 A_BomaMG_comp13462_c0_seq1
398bp
tRNA_methyltransferase_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016429 F tRNA (adenine-N1-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0031515 C tRNA (m1A) methyltransferase complex
GO:0032259 P methylation
FPKM:2.04 TPM:1.88
3358 A_BomaMG_comp13464_c0_seq1
243bp
FPKM:3.06 TPM:2.83
3359 A_BomaMG_comp134666_c0_seq1
415bp
PREDICTED:_uncharacterized_protein_LOC105389752_[Plutella_xylostella]
FPKM:2.03 TPM:1.88
3360 A_BomaMG_comp13466_c0_seq1
206bp
FPKM:3.79 TPM:3.51
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