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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3271 A_BomaMG_comp13375_c0_seq1
665bp
PREDICTED:_transcriptional_repressor_p66-alpha_[Bombyx_mori]
FPKM:7.36 TPM:6.81
3272 A_BomaMG_comp133786_c0_seq1
439bp
FPKM:2.77 TPM:2.56
3273 A_BomaMG_comp13378_c0_seq1
823bp
FPKM:4.01 TPM:3.71
3274 A_BomaMG_comp13379_c0_seq1
791bp
ML-domain_containing_secreted_protein_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:8.43 TPM:7.81
3275 A_BomaMG_comp13385_c0_seq1
1257bp
PREDICTED:_tyrosine-protein_kinase_Abl_isoform_X3_[Bombyx_mori]
FPKM:6.73 TPM:6.23
3276 A_BomaMG_comp13386_c0_seq1
897bp
FPKM:5.11 TPM:4.73
3277 A_BomaMG_comp133885_c0_seq1
539bp
PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:2.75 TPM:2.55
3278 A_BomaMG_comp13388_c0_seq1
599bp
PREDICTED:_protein_PRRC1-like_[Papilio_xuthus]
GO:0005794 C Golgi apparatus
FPKM:6.25 TPM:5.79
3279 A_BomaMG_comp1338_c0_seq1
210bp
FPKM:1.74 TPM:1.61
3280 A_BomaMG_comp13390_c0_seq1
1763bp
PREDICTED:_DNA_polymerase_alpha_subunit_B_isoform_X1_[Papilio_xuthus]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000722 P telomere maintenance via recombination
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005658 C alpha DNA polymerase:primase complex
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0046982 F protein heterodimerization activity
GO:0071897 P DNA biosynthetic process
FPKM:6.29 TPM:5.82
3281 A_BomaMG_comp133910_c0_seq1
602bp
PREDICTED:_dnaJ_homolog_subfamily_C_member_13_isoform_X2_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0070062 C extracellular exosome
GO:0071203 C WASH complex
GO:1902954 P regulation of early endosome to recycling endosome transport
GO:2000641 P regulation of early endosome to late endosome transport
FPKM:2.26 TPM:2.09
3282 A_BomaMG_comp13391_c0_seq1
326bp
FPKM:5.37 TPM:4.97
3283 A_BomaMG_comp13392_c0_seq1
3112bp
PREDICTED:_zinc_finger_CCHC_domain-containing_protein_8_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:6.23 TPM:5.77
3284 A_BomaMG_comp13393_c0_seq1
1641bp
UDP-glycosyltransferase_UGT42A2_precursor_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0032496 P response to lipopolysaccharide
GO:0043231 C intracellular membrane-bounded organelle
GO:0071361 P cellular response to ethanol
GO:0071378 P cellular response to growth hormone stimulus
GO:0071385 P cellular response to glucocorticoid stimulus
GO:0071394 P cellular response to testosterone stimulus
FPKM:8.23 TPM:7.62
3285 A_BomaMG_comp13394_c0_seq1
1570bp
FPKM:4.80 TPM:4.44
3286 A_BomaMG_comp13395_c0_seq1
1002bp
FPKM:5.28 TPM:4.89
3287 A_BomaMG_comp13396_c0_seq1
386bp
PREDICTED:_vacuolar_fusion_protein_CCZ1_homolog_[Papilio_polytes]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0031988 C vesicle
GO:0043231 C intracellular membrane-bounded organelle
FPKM:0.00 TPM:0.00
3288 A_BomaMG_comp13396_c0_seq2
1481bp
PREDICTED:_vacuolar_fusion_protein_CCZ1_homolog_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016235 C aggresome
GO:0031988 C vesicle
GO:0043231 C intracellular membrane-bounded organelle
FPKM:7.52 TPM:6.97
3289 A_BomaMG_comp13397_c0_seq1
1753bp
PREDICTED:_GRAM_domain-containing_protein_1B-like_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.00 TPM:0.00
3290 A_BomaMG_comp13397_c0_seq2
1754bp
PREDICTED:_GRAM_domain-containing_protein_1B-like_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:4.24 TPM:3.92
3291 A_BomaMG_comp133991_c0_seq1
388bp
FPKM:2.95 TPM:2.74
3292 A_BomaMG_comp13399_c0_seq1
600bp
PREDICTED:_ATP-binding_cassette_sub-family_B_member_7,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006879 P cellular iron ion homeostasis
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:5.45 TPM:5.05
3293 A_BomaMG_comp13399_c0_seq2
654bp
PREDICTED:_ATP-binding_cassette_sub-family_B_member_7,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006879 P cellular iron ion homeostasis
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:3.27 TPM:3.03
3294 A_BomaMG_comp1339_c0_seq1
397bp
_putative_cuticle_protein_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:1.42 TPM:1.31
3295 A_BomaMG_comp134001_c0_seq1
403bp
FPKM:1.53 TPM:1.42
3296 A_BomaMG_comp13400_c0_seq1
834bp
PREDICTED:_N-alpha-acetyltransferase_11_[Amyelois_transitella]
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006474 P N-terminal protein amino acid acetylation
GO:0006475 P internal protein amino acid acetylation
GO:0008080 F N-acetyltransferase activity
GO:0016020 C membrane
GO:0016407 F acetyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017198 P N-terminal peptidyl-serine acetylation
GO:0018002 P N-terminal peptidyl-glutamic acid acetylation
GO:0022626 C cytosolic ribosome
GO:0031415 C NatA complex
GO:0043022 F ribosome binding
GO:1990189 F peptide-serine-N-acetyltransferase activity
GO:1990190 F peptide-glutamate-N-acetyltransferase activity
FPKM:27.29 TPM:25.27
3297 A_BomaMG_comp13401_c0_seq1
867bp
FPKM:8.76 TPM:8.12
3298 A_BomaMG_comp13403_c0_seq1
764bp
FPKM:2.15 TPM:1.99
3299 A_BomaMG_comp13403_c1_seq1
385bp
FPKM:5.00 TPM:4.63
3300 A_BomaMG_comp13404_c0_seq1
752bp
PREDICTED:_CLIP-associating_protein_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
FPKM:7.66 TPM:7.09
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