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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3121 A_BomaMG_comp13250_c0_seq1
640bp
FPKM:3.03 TPM:2.81
3122 A_BomaMG_comp132513_c0_seq1
288bp
FPKM:2.19 TPM:2.03
3123 A_BomaMG_comp13251_c0_seq1
1419bp
PREDICTED:_peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase_[Bombyx_mori]
GO:0000224 F peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity
GO:0005737 C cytoplasm
GO:0006516 P glycoprotein catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:6.40 TPM:5.92
3124 A_BomaMG_comp132526_c0_seq1
384bp
FPKM:2.51 TPM:2.32
3125 A_BomaMG_comp13252_c0_seq1
374bp
MBF2_[Samia_cynthia]
FPKM:13.37 TPM:12.38
3126 A_BomaMG_comp13254_c0_seq1
292bp
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:5.74 TPM:5.32
3127 A_BomaMG_comp132567_c0_seq1
435bp
hypothetical_protein_[Zea_mays]
FPKM:2.14 TPM:1.98
3128 A_BomaMG_comp13256_c0_seq1
398bp
hypothetical_protein_SERLA73DRAFT_157450_[Serpula_lacrymans_var._lacrymans_S7.3]
FPKM:5.48 TPM:5.07
3129 A_BomaMG_comp13256_c1_seq1
550bp
FPKM:3.49 TPM:3.24
3130 A_BomaMG_comp13257_c0_seq1
796bp
hypothetical_protein_KGM_17736_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0005125 F cytokine activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006954 P inflammatory response
FPKM:8.32 TPM:7.70
3131 A_BomaMG_comp13258_c0_seq1
1736bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
FPKM:6.63 TPM:6.14
3132 A_BomaMG_comp13258_c0_seq2
1275bp
Ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
FPKM:5.76 TPM:5.33
3133 A_BomaMG_comp13259_c0_seq1
252bp
hypothetical_protein_X975_06327,_partial_[Stegodyphus_mimosarum]
FPKM:2.72 TPM:2.52
3134 A_BomaMG_comp1325_c0_seq1
214bp
hypothetical_protein_MGU_07759_[Metarhizium_guizhouense_ARSEF_977]
FPKM:0.81 TPM:0.75
3135 A_BomaMG_comp13261_c0_seq1
1239bp
hypothetical_protein_[Enterococcus_faecalis]
FPKM:3.99 TPM:3.69
3136 A_BomaMG_comp132651_c0_seq1
422bp
PREDICTED:_nuclear_factor_related_to_kappa-B-binding_protein_isoform_X1_[Bombyx_mori]
GO:0002020 F protease binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006954 P inflammatory response
GO:0006974 P cellular response to DNA damage stimulus
GO:0031011 C Ino80 complex
FPKM:2.54 TPM:2.35
3137 A_BomaMG_comp132658_c0_seq1
229bp
flagellar_hook-length_control_protein_[Geobacter_daltonii]
FPKM:4.99 TPM:4.62
3138 A_BomaMG_comp13265_c0_seq1
401bp
FPKM:2.78 TPM:2.57
3139 A_BomaMG_comp13266_c0_seq1
542bp
3-dehydroquinate_synthase_[Maribacter_sp._Hel_I_7]
FPKM:8.01 TPM:7.42
3140 A_BomaMG_comp13268_c0_seq1
274bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_45_isoform_X2_[Papilio_xuthus]
FPKM:3.92 TPM:3.63
3141 A_BomaMG_comp13268_c1_seq1
711bp
FPKM:9.02 TPM:8.35
3142 A_BomaMG_comp1326_c0_seq1
368bp
FPKM:1.45 TPM:1.35
3143 A_BomaMG_comp13270_c0_seq1
850bp
PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:5.58 TPM:5.16
3144 A_BomaMG_comp13270_c0_seq2
902bp
PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:0.93 TPM:0.86
3145 A_BomaMG_comp132718_c0_seq1
1407bp
PREDICTED:_protein-lysine_methyltransferase_METTL21D-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
FPKM:2.13 TPM:1.97
3146 A_BomaMG_comp13271_c0_seq1
1271bp
PREDICTED:_magnesium_transporter_NIPA2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903830 P magnesium ion transmembrane transport
FPKM:5.31 TPM:4.92
3147 A_BomaMG_comp13272_c0_seq1
625bp
PREDICTED:_protein_C10-like_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:6.11 TPM:5.66
3148 A_BomaMG_comp13273_c0_seq1
448bp
FPKM:6.40 TPM:5.92
3149 A_BomaMG_comp13273_c1_seq1
1083bp
PREDICTED:_inducible_metalloproteinase_inhibitor_protein-like_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:7.51 TPM:6.95
3150 A_BomaMG_comp132746_c0_seq1
610bp
PREDICTED:_nuclear_receptor_coactivator_6-like_[Bombyx_mori]
FPKM:2.77 TPM:2.56
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