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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3061 A_BomaMG_comp132052_c0_seq1
305bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13D,_partial_[Amyelois_transitella]
FPKM:3.53 TPM:3.27
3062 A_BomaMG_comp132056_c0_seq1
1004bp
hypothetical_protein_EGR_04246_[Echinococcus_granulosus]
FPKM:1.85 TPM:1.71
3063 A_BomaMG_comp132064_c0_seq1
301bp
FPKM:3.93 TPM:3.64
3064 A_BomaMG_comp13206_c0_seq1
2145bp
ubiquitin-conjugating_enzyme_E2-17_kDa_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005875 C microtubule associated complex
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007140 P male meiotic nuclear division
GO:0007286 P spermatid development
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0016322 P neuron remodeling
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0030718 P germ-line stem cell population maintenance
GO:0031625 F ubiquitin protein ligase binding
GO:0031647 P regulation of protein stability
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045676 P regulation of R7 cell differentiation
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
FPKM:69.11 TPM:64.00
3065 A_BomaMG_comp13207_c0_seq1
1501bp
PREDICTED:_fizzy-related_protein_homolog_[Plutella_xylostella]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010997 F anaphase-promoting complex binding
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031965 C nuclear membrane
GO:0040020 P regulation of meiotic nuclear division
GO:0045732 P positive regulation of protein catabolic process
GO:0051301 P cell division
GO:0051488 P positive regulation of ubiquitin protein ligase activity
GO:0070306 P lens fiber cell differentiation
GO:0090344 P negative regulation of cell aging
GO:0097027 F ubiquitin-protein transferase activator activity
FPKM:5.97 TPM:5.53
3066 A_BomaMG_comp132081_c0_seq1
697bp
PREDICTED:_RNA-binding_protein_28_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
FPKM:2.50 TPM:2.31
3067 A_BomaMG_comp132085_c0_seq1
374bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
FPKM:4.22 TPM:3.91
3068 A_BomaMG_comp132085_c0_seq2
373bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
3069 A_BomaMG_comp13208_c0_seq1
695bp
PREDICTED:_frizzled-10-like_[Papilio_xuthus]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034260 P negative regulation of GTPase activity
GO:0035567 P non-canonical Wnt signaling pathway
GO:0038031 P non-canonical Wnt signaling pathway via JNK cascade
GO:0042813 F Wnt-activated receptor activity
GO:0043507 P positive regulation of JUN kinase activity
GO:0043547 P positive regulation of GTPase activity
GO:0060070 P canonical Wnt signaling pathway
FPKM:8.38 TPM:7.76
3070 A_BomaMG_comp132093_c0_seq1
911bp
PREDICTED:_exonuclease_mut-7_homolog_[Bombyx_mori]
FPKM:2.37 TPM:2.19
3071 A_BomaMG_comp13209_c0_seq1
787bp
PREDICTED:_cytokine-inducible_SH2-containing_protein_isoform_X2_[Papilio_polytes]
FPKM:4.75 TPM:4.40
3072 A_BomaMG_comp13209_c1_seq1
363bp
FPKM:9.51 TPM:8.81
3073 A_BomaMG_comp1320_c0_seq1
397bp
hypothetical_protein_[Arthrobacter_sp._I3]
FPKM:1.57 TPM:1.46
3074 A_BomaMG_comp132114_c0_seq1
519bp
FPKM:3.21 TPM:2.98
3075 A_BomaMG_comp13211_c0_seq1
1763bp
PREDICTED:_protein_SMG9_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
FPKM:7.56 TPM:7.00
3076 A_BomaMG_comp132136_c0_seq1
362bp
PREDICTED:_macoilin_[Bombyx_mori]
FPKM:3.75 TPM:3.47
3077 A_BomaMG_comp13213_c0_seq1
822bp
PREDICTED:_frizzled-2-like_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006898 P receptor-mediated endocytosis
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007435 P salivary gland morphogenesis
GO:0008045 P motor neuron axon guidance
GO:0008407 P chaeta morphogenesis
GO:0008585 P female gonad development
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016201 P synaptic target inhibition
GO:0016477 P cell migration
GO:0017147 F Wnt-protein binding
GO:0030139 C endocytic vesicle
GO:0030165 F PDZ domain binding
GO:0031290 P retinal ganglion cell axon guidance
GO:0035206 P regulation of hemocyte proliferation
GO:0035567 P non-canonical Wnt signaling pathway
GO:0042813 F Wnt-activated receptor activity
GO:0048675 P axon extension
GO:0050808 P synapse organization
GO:0060070 P canonical Wnt signaling pathway
FPKM:6.82 TPM:6.31
3078 A_BomaMG_comp13214_c0_seq1
655bp
Uncharacterized_protein_OBRU01_00296_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:8.26 TPM:7.64
3079 A_BomaMG_comp132153_c0_seq1
1010bp
FPKM:1.96 TPM:1.82
3080 A_BomaMG_comp132155_c0_seq1
500bp
PREDICTED:_tau-tubulin_kinase_1_isoform_X3_[Bombyx_mori]
FPKM:2.45 TPM:2.27
3081 A_BomaMG_comp13215_c0_seq1
487bp
FPKM:5.33 TPM:4.93
3082 A_BomaMG_comp13216_c0_seq1
2018bp
PREDICTED:_nuclear_hormone_receptor_family_member_nhr-8-like_[Amyelois_transitella]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
FPKM:6.59 TPM:6.11
3083 A_BomaMG_comp13217_c0_seq1
717bp
PREDICTED:_rab11_family-interacting_protein_4_isoform_X3_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032456 P endocytic recycling
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051959 F dynein light intermediate chain binding
GO:0055037 C recycling endosome
GO:0055038 C recycling endosome membrane
GO:0061512 P protein localization to cilium
GO:0070164 P negative regulation of adiponectin secretion
FPKM:1.14 TPM:1.05
3084 A_BomaMG_comp13217_c0_seq2
669bp
PREDICTED:_rab11_family-interacting_protein_4A_isoform_X2_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032456 P endocytic recycling
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051959 F dynein light intermediate chain binding
GO:0055037 C recycling endosome
GO:0055038 C recycling endosome membrane
GO:0061512 P protein localization to cilium
GO:0070164 P negative regulation of adiponectin secretion
FPKM:3.41 TPM:3.16
3085 A_BomaMG_comp132180_c0_seq1
474bp
FPKM:1.85 TPM:1.72
3086 A_BomaMG_comp13219_c0_seq1
1494bp
glutaredoxin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005773 C vacuole
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0009055 F electron transfer activity
GO:0015035 F protein-disulfide reductase activity
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
FPKM:76.69 TPM:71.01
3087 A_BomaMG_comp1321_c0_seq1
242bp
PREDICTED:_uncharacterized_protein_LOC106138999_[Amyelois_transitella]
FPKM:1.55 TPM:1.43
3088 A_BomaMG_comp1321_c1_seq1
310bp
Uncharacterized_protein_OBRU01_23297,_partial_[Operophtera_brumata]
FPKM:0.78 TPM:0.73
3089 A_BomaMG_comp13220_c0_seq1
565bp
hypothetical_protein_[Helicoverpa_armigera]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:68.84 TPM:63.74
3090 A_BomaMG_comp132238_c0_seq1
668bp
FPKM:2.09 TPM:1.93
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