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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2881 A_BomaMG_comp13056_c0_seq1
1429bp
PREDICTED:_TIMELESS-interacting_protein_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0044770 P cell cycle phase transition
GO:0048478 P replication fork protection
GO:0051301 P cell division
FPKM:8.36 TPM:7.74
2882 A_BomaMG_comp13057_c0_seq1
2261bp
PREDICTED:_inositol_polyphosphate_5-phosphatase_K-like_isoform_X1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0004445 F inositol-polyphosphate 5-phosphatase activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010977 P negative regulation of neuron projection development
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019898 C extrinsic component of membrane
GO:0030426 C growth cone
GO:0031115 P negative regulation of microtubule polymerization
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0034485 F phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity
GO:0043198 C dendritic shaft
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0052658 F inositol-1,4,5-trisphosphate 5-phosphatase activity
GO:0052659 F inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity
FPKM:7.33 TPM:6.79
2883 A_BomaMG_comp1305_c0_seq1
321bp
hypothetical_protein_[Bacteroides_sp._2_2_4]
FPKM:1.69 TPM:1.57
2884 A_BomaMG_comp13060_c0_seq1
1971bp
PREDICTED:_negative_elongation_factor_D_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:5.70 TPM:5.28
2885 A_BomaMG_comp13060_c0_seq2
2085bp
PREDICTED:_negative_elongation_factor_D_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:3.30 TPM:3.05
2886 A_BomaMG_comp130617_c0_seq1
804bp
PREDICTED:_uncharacterized_protein_LOC105389720_[Plutella_xylostella]
FPKM:2.72 TPM:2.52
2887 A_BomaMG_comp13062_c0_seq1
1000bp
C-type_lectin_5_precursor_[Bombyx_mori]
FPKM:10.21 TPM:9.46
2888 A_BomaMG_comp13063_c0_seq1
1681bp
PREDICTED:_testis-expressed_sequence_2_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006665 P sphingolipid metabolic process
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:7.49 TPM:6.94
2889 A_BomaMG_comp13063_c0_seq2
1056bp
PREDICTED:_testis-expressed_sequence_2_protein-like_[Bombyx_mori]
FPKM:7.82 TPM:7.24
2890 A_BomaMG_comp13063_c0_seq3
1670bp
PREDICTED:_testis-expressed_sequence_2_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006665 P sphingolipid metabolic process
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.00 TPM:0.00
2891 A_BomaMG_comp13065_c0_seq1
442bp
CLIP-associating_protein_[Papilio_machaon]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
FPKM:0.00 TPM:0.00
2892 A_BomaMG_comp13065_c0_seq2
785bp
CLIP-associating_protein_[Papilio_machaon]
GO:0000022 P mitotic spindle elongation
GO:0000070 P mitotic sister chromatid segregation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000922 C spindle pole
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005876 C spindle microtubule
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030723 P ovarian fusome organization
GO:0031116 P positive regulation of microtubule polymerization
GO:0032154 C cleavage furrow
GO:0035099 P hemocyte migration
GO:0035371 C microtubule plus-end
GO:0040001 P establishment of mitotic spindle localization
GO:0042995 C cell projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046602 P regulation of mitotic centrosome separation
GO:0048477 P oogenesis
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051315 P attachment of mitotic spindle microtubules to kinetochore
GO:0090307 P mitotic spindle assembly
FPKM:6.79 TPM:6.29
2893 A_BomaMG_comp13067_c0_seq1
274bp
hypothetical_protein_PPERSA_08056_[Pseudocohnilembus_persalinus]
FPKM:3.92 TPM:3.63
2894 A_BomaMG_comp13068_c0_seq1
444bp
fatty_acid_synthase,_partial_[Agrotis_segetum]
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005623 C obsolete cell
GO:0006089 P lactate metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0031177 F phosphopantetheine binding
GO:0032100 P positive regulation of appetite
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:10.08 TPM:9.33
2895 A_BomaMG_comp13069_c0_seq1
270bp
unknown_[Bombyx_mori]
FPKM:1.11 TPM:1.03
2896 A_BomaMG_comp13070_c0_seq1
883bp
PREDICTED:_survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:9.65 TPM:8.94
2897 A_BomaMG_comp13073_c0_seq1
1282bp
alcohol_dehydrogenase_14,_partial_[Helicoverpa_assulta]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:15.69 TPM:14.53
2898 A_BomaMG_comp13073_c0_seq2
1366bp
alcohol_dehydrogenase_14,_partial_[Helicoverpa_assulta]
GO:0005737 C cytoplasm
GO:0006693 P prostaglandin metabolic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0032440 F 2-alkenal reductase [NAD(P)+] activity
GO:0036132 F 13-prostaglandin reductase activity
GO:0047522 F 15-oxoprostaglandin 13-oxidase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:100.68 TPM:93.23
2899 A_BomaMG_comp13076_c0_seq1
230bp
Isopenicillin_N_epimerase_component_1_[Valsa_mali_var._pyri]
FPKM:3.01 TPM:2.79
2900 A_BomaMG_comp13076_c0_seq2
391bp
Isopenicillin_N_epimerase_component_1_[Valsa_mali_var._pyri]
FPKM:4.54 TPM:4.21
2901 A_BomaMG_comp130797_c0_seq1
773bp
FPKM:2.29 TPM:2.12
2902 A_BomaMG_comp13079_c0_seq1
408bp
FPKM:1.80 TPM:1.66
2903 A_BomaMG_comp13080_c0_seq1
309bp
FPKM:3.43 TPM:3.17
2904 A_BomaMG_comp13081_c0_seq1
793bp
signal_peptidase_complex_subunit_2_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005787 C signal peptidase complex
GO:0005789 C endoplasmic reticulum membrane
GO:0006465 P signal peptide processing
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0045047 P protein targeting to ER
FPKM:74.15 TPM:68.66
2905 A_BomaMG_comp13082_c0_seq1
2744bp
PREDICTED:_talin-1_isoform_X7_[Papilio_xuthus]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0051015 F actin filament binding
FPKM:5.33 TPM:4.93
2906 A_BomaMG_comp13082_c0_seq2
2622bp
PREDICTED:_talin-1_isoform_X7_[Papilio_xuthus]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0051015 F actin filament binding
FPKM:1.27 TPM:1.17
2907 A_BomaMG_comp13083_c0_seq1
2056bp
sugar_ABC_transporter_permease_[Sphaerochaeta_globosa]
FPKM:8.82 TPM:8.17
2908 A_BomaMG_comp130852_c0_seq1
358bp
PREDICTED:_E3_ubiquitin-protein_ligase_RFWD2-like_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:4.03 TPM:3.73
2909 A_BomaMG_comp13089_c0_seq1
1614bp
PREDICTED:_SH3_domain-binding_glutamic_acid-rich_protein_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0017124 F SH3 domain binding
FPKM:30.91 TPM:28.62
2910 A_BomaMG_comp1308_c0_seq1
253bp
FPKM:0.45 TPM:0.42
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