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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2851 A_BomaMG_comp13027_c0_seq1
1153bp
prohibitin_protein_WPH_[Bombyx_mori]
GO:0002165 P instar larval or pupal development
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005811 C lipid droplet
GO:0005875 C microtubule associated complex
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0019233 P sensory perception of pain
GO:0071456 P cellular response to hypoxia
FPKM:43.28 TPM:40.08
2852 A_BomaMG_comp13027_c0_seq2
1171bp
prohibitin_protein_WPH_[Bombyx_mori]
GO:0002165 P instar larval or pupal development
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005811 C lipid droplet
GO:0005875 C microtubule associated complex
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0019233 P sensory perception of pain
GO:0071456 P cellular response to hypoxia
FPKM:14.79 TPM:13.70
2853 A_BomaMG_comp13029_c0_seq1
1246bp
PREDICTED:_protein_RTF2_homolog_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:8.96 TPM:8.30
2854 A_BomaMG_comp1302_c0_seq1
448bp
PREDICTED:_uncharacterized_protein_LOC106129228_[Amyelois_transitella]
FPKM:1.27 TPM:1.18
2855 A_BomaMG_comp130320_c0_seq1
451bp
Uncharacterised_protein_[Salmonella_enterica_subsp._enterica_serovar_Typhi]
FPKM:3.90 TPM:3.61
2856 A_BomaMG_comp13032_c0_seq1
949bp
PREDICTED:_uncharacterized_protein_LOC101735385_isoform_X1_[Bombyx_mori]
FPKM:6.18 TPM:5.72
2857 A_BomaMG_comp13032_c0_seq2
1035bp
PREDICTED:_uncharacterized_protein_LOC101735385_isoform_X1_[Bombyx_mori]
FPKM:4.04 TPM:3.74
2858 A_BomaMG_comp13033_c0_seq1
1939bp
PREDICTED:_uncharacterized_protein_LOC106136134_[Amyelois_transitella]
FPKM:8.06 TPM:7.47
2859 A_BomaMG_comp13034_c0_seq1
1118bp
PREDICTED:_proliferating_cell_nuclear_antigen_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0030337 F DNA polymerase processivity factor activity
FPKM:10.26 TPM:9.50
2860 A_BomaMG_comp13035_c0_seq1
723bp
Cytochrome_b5_[Operophtera_brumata]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:4.80 TPM:4.44
2861 A_BomaMG_comp13035_c0_seq2
1295bp
Cytochrome_b5_[Operophtera_brumata]
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006696 P ergosterol biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:4.51 TPM:4.17
2862 A_BomaMG_comp13036_c0_seq1
468bp
PREDICTED:_uncharacterized_protein_LOC101738318_[Bombyx_mori]
FPKM:11.12 TPM:10.30
2863 A_BomaMG_comp13037_c0_seq1
1558bp
hypothetical_protein_KGM_01171_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
FPKM:8.45 TPM:7.83
2864 A_BomaMG_comp13038_c0_seq1
1431bp
FPKM:8.02 TPM:7.42
2865 A_BomaMG_comp13039_c0_seq1
495bp
FPKM:9.52 TPM:8.81
2866 A_BomaMG_comp1303_c0_seq1
207bp
PREDICTED:_uncharacterized_protein_ZK1073.1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
FPKM:1.85 TPM:1.72
2867 A_BomaMG_comp13040_c0_seq1
1176bp
replication_factor_C4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
FPKM:10.04 TPM:9.30
2868 A_BomaMG_comp13041_c0_seq1
1704bp
PREDICTED:_twinfilin_[Amyelois_transitella]
GO:0003779 F actin binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0030837 P negative regulation of actin filament polymerization
FPKM:6.94 TPM:6.43
2869 A_BomaMG_comp13041_c0_seq2
304bp
FPKM:1.49 TPM:1.38
2870 A_BomaMG_comp13044_c0_seq1
425bp
FPKM:5.99 TPM:5.54
2871 A_BomaMG_comp13045_c0_seq1
261bp
hypothetical_protein_[Desulfosarcina_cetonica]
FPKM:14.16 TPM:13.11
2872 A_BomaMG_comp13045_c0_seq2
276bp
MULTISPECIES:_transcriptional_regulator_[Exiguobacterium]
FPKM:3.28 TPM:3.04
2873 A_BomaMG_comp13046_c0_seq1
1433bp
COP_complex_beta_subunit_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030126 C COPI vesicle coat
GO:0030663 C COPI-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
FPKM:43.01 TPM:39.83
2874 A_BomaMG_comp13048_c0_seq1
338bp
FPKM:9.94 TPM:9.20
2875 A_BomaMG_comp13049_c0_seq1
1027bp
hypothetical_protein_RR46_00646_[Papilio_xuthus]
FPKM:8.57 TPM:7.93
2876 A_BomaMG_comp13051_c0_seq1
552bp
hypothetical_protein_[Flavobacteriaceae_bacterium_HQM9]
FPKM:8.87 TPM:8.22
2877 A_BomaMG_comp13052_c0_seq1
1511bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
FPKM:7.02 TPM:6.50
2878 A_BomaMG_comp13053_c0_seq1
592bp
hypothetical_protein,_partial_[Leptospira_interrogans]
FPKM:3.05 TPM:2.83
2879 A_BomaMG_comp13054_c0_seq1
327bp
FPKM:12.06 TPM:11.16
2880 A_BomaMG_comp13055_c0_seq1
1271bp
PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0007275 P multicellular organism development
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
FPKM:5.84 TPM:5.41
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