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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2821 A_BomaMG_comp12998_c0_seq1
689bp
putative_dynein_light_chain_Tctex-type_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.66 TPM:1.54
2822 A_BomaMG_comp12998_c0_seq2
769bp
putative_dynein_light_chain_Tctex-type_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.97 TPM:1.82
2823 A_BomaMG_comp12999_c0_seq1
1161bp
HCLS1-associated_protein_X-1_[Operophtera_brumata]
FPKM:25.37 TPM:23.49
2824 A_BomaMG_comp12999_c0_seq2
1179bp
HCLS1-associated_protein_X-1_[Operophtera_brumata]
FPKM:14.14 TPM:13.09
2825 A_BomaMG_comp1299_c0_seq1
325bp
FPKM:0.71 TPM:0.65
2826 A_BomaMG_comp129_c0_seq1
352bp
FPKM:0.79 TPM:0.74
2827 A_BomaMG_comp13001_c0_seq1
1932bp
PREDICTED:_2',5'-phosphodiesterase_12_[Amyelois_transitella]
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:4.79 TPM:4.44
2828 A_BomaMG_comp13002_c0_seq1
1646bp
PREDICTED:_N-alpha-acetyltransferase_30-like_[Amyelois_transitella]
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008080 F N-acetyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0031417 C NatC complex
FPKM:12.54 TPM:11.61
2829 A_BomaMG_comp13002_c1_seq1
1892bp
PREDICTED:_NEDD8-activating_enzyme_E1_regulatory_subunit_[Papilio_machaon]
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0019781 F NEDD8 activating enzyme activity
GO:0045116 P protein neddylation
FPKM:4.43 TPM:4.10
2830 A_BomaMG_comp13003_c0_seq1
237bp
PREDICTED:_NADH-cytochrome_b5_reductase_2_isoform_X1_[Bombyx_mori]
FPKM:1.66 TPM:1.54
2831 A_BomaMG_comp13008_c0_seq1
747bp
Baculoviral_IAP_repeat-containing_protein_6_[Papilio_machaon]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:8.98 TPM:8.32
2832 A_BomaMG_comp13009_c0_seq1
414bp
cyclase_[Mycobacterium_heraklionense]
FPKM:6.71 TPM:6.21
2833 A_BomaMG_comp1300_c0_seq1
344bp
PREDICTED:_gamma-secretase-activating_protein_[Vicugna_pacos]
FPKM:1.04 TPM:0.96
2834 A_BomaMG_comp130124_c0_seq1
255bp
FPKM:0.88 TPM:0.81
2835 A_BomaMG_comp13012_c0_seq1
517bp
hypothetical_protein_KGM_15584_[Danaus_plexippus]
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0030904 C retromer complex
GO:0031410 C cytoplasmic vesicle
GO:0032439 P endosomal transport
GO:0034058 P endosomal vesicle fusion
GO:0042147 P retrograde transport, endosome to Golgi
GO:0044354 C macropinosome
GO:0046872 F metal ion binding
GO:0048549 P positive regulation of pinocytosis
GO:0070062 C extracellular exosome
GO:0090160 P Golgi to lysosome transport
GO:1901981 F phosphatidylinositol phosphate binding
FPKM:9.33 TPM:8.64
2836 A_BomaMG_comp13013_c0_seq1
922bp
membrane-bound_metallopeptidase_[Perkinsela_sp._CCAP_1560/4]
FPKM:10.56 TPM:9.78
2837 A_BomaMG_comp13014_c0_seq1
1894bp
PREDICTED:_probable_RNA-binding_protein_CG14230_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005575 C cellular_component
GO:0022008 P neurogenesis
FPKM:3.23 TPM:2.99
2838 A_BomaMG_comp13014_c0_seq2
1780bp
PREDICTED:_probable_RNA-binding_protein_CG14230_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005575 C cellular_component
GO:0022008 P neurogenesis
FPKM:1.66 TPM:1.54
2839 A_BomaMG_comp13016_c0_seq1
1220bp
PREDICTED:_homeotic_protein_female_sterile_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:6.26 TPM:5.79
2840 A_BomaMG_comp13017_c0_seq1
648bp
PREDICTED:_reticulon-4-interacting_protein_1,_mitochondrial-like_[Papilio_machaon]
GO:0005739 C mitochondrion
GO:0008270 F zinc ion binding
GO:0010842 P retina layer formation
GO:0016491 F oxidoreductase activity
GO:0042462 P eye photoreceptor cell development
GO:0055114 P obsolete oxidation-reduction process
FPKM:10.53 TPM:9.75
2841 A_BomaMG_comp13018_c0_seq1
438bp
FPKM:0.00 TPM:0.00
2842 A_BomaMG_comp13018_c0_seq2
2489bp
PREDICTED:_uncharacterized_protein_LOC105383856_isoform_X8_[Plutella_xylostella]
FPKM:7.84 TPM:7.26
2843 A_BomaMG_comp13018_c0_seq3
439bp
FPKM:5.66 TPM:5.24
2844 A_BomaMG_comp13019_c0_seq1
1023bp
PREDICTED:_15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]-like_[Plutella_xylostella]
GO:0003824 F catalytic activity
GO:0004957 F prostaglandin E receptor activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007565 P female pregnancy
GO:0007567 P parturition
GO:0008152 P metabolic process
GO:0016323 C basolateral plasma membrane
GO:0016404 F 15-hydroxyprostaglandin dehydrogenase (NAD+) activity
GO:0016491 F oxidoreductase activity
GO:0030728 P ovulation
GO:0045786 P negative regulation of cell cycle
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070403 F NAD+ binding
GO:0070493 P thrombin-activated receptor signaling pathway
GO:0097070 P ductus arteriosus closure
FPKM:17.17 TPM:15.90
2845 A_BomaMG_comp13019_c1_seq1
221bp
FPKM:3.56 TPM:3.29
2846 A_BomaMG_comp1301_c0_seq1
723bp
PREDICTED:_centrosomal_protein_of_97_kDa_[Bombyx_mori]
FPKM:1.13 TPM:1.04
2847 A_BomaMG_comp13021_c0_seq1
693bp
PREDICTED:_serine/arginine_repetitive_matrix_protein_2_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0070742 F C2H2 zinc finger domain binding
GO:0071013 C catalytic step 2 spliceosome
FPKM:8.48 TPM:7.85
2848 A_BomaMG_comp13023_c0_seq1
2040bp
PREDICTED:_cytosolic_carboxypeptidase-like_protein_5_isoform_X3_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0015631 F tubulin binding
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0035608 P protein deglutamylation
GO:0035611 P protein branching point deglutamylation
GO:0046872 F metal ion binding
GO:0051607 P defense response to virus
GO:0072686 C mitotic spindle
FPKM:6.37 TPM:5.90
2849 A_BomaMG_comp13026_c0_seq1
2460bp
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0042995 C cell projection
FPKM:8.31 TPM:7.70
2850 A_BomaMG_comp130273_c0_seq1
621bp
FPKM:2.54 TPM:2.36
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