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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2791 A_BomaMG_comp12960_c0_seq2
3318bp
PREDICTED:_von_Willebrand_factor_A_domain-containing_protein_8_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
FPKM:4.68 TPM:4.34
2792 A_BomaMG_comp12962_c0_seq1
2456bp
PREDICTED:_LOW_QUALITY_PROTEIN:_G_protein-coupled_receptor_kinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001664 F G protein-coupled receptor binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004703 F G protein-coupled receptor kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007603 P phototransduction, visible light
GO:0016060 P metarhodopsin inactivation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035091 F phosphatidylinositol binding
GO:0050254 F rhodopsin kinase activity
FPKM:4.46 TPM:4.13
2793 A_BomaMG_comp12964_c0_seq1
711bp
hypothetical_protein_KGM_11778_[Danaus_plexippus]
FPKM:6.27 TPM:5.80
2794 A_BomaMG_comp12965_c0_seq1
2297bp
PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:5.18 TPM:4.80
2795 A_BomaMG_comp12966_c0_seq1
596bp
FPKM:5.15 TPM:4.77
2796 A_BomaMG_comp12968_c0_seq1
246bp
FPKM:5.39 TPM:4.99
2797 A_BomaMG_comp12968_c1_seq1
596bp
FPKM:4.82 TPM:4.47
2798 A_BomaMG_comp12969_c0_seq1
323bp
NADPH_oxidoreductase_[Bombyx_mori]
FPKM:1.91 TPM:1.76
2799 A_BomaMG_comp12969_c1_seq1
277bp
translocon-associated_protein_gamma_isoform_2_[Bombyx_mori]
FPKM:1.73 TPM:1.60
2800 A_BomaMG_comp1296_c0_seq1
219bp
FPKM:0.00 TPM:0.00
2801 A_BomaMG_comp1296_c1_seq1
233bp
FPKM:1.17 TPM:1.09
2802 A_BomaMG_comp12971_c0_seq1
1828bp
FPKM:4.81 TPM:4.45
2803 A_BomaMG_comp12972_c0_seq1
1291bp
cuticular_protein_RR-3_motif_148_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:5.70 TPM:5.28
2804 A_BomaMG_comp12972_c1_seq1
513bp
FPKM:1.94 TPM:1.80
2805 A_BomaMG_comp12975_c0_seq1
527bp
PREDICTED:_DENN_domain-containing_protein_4C_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
FPKM:5.79 TPM:5.36
2806 A_BomaMG_comp12976_c0_seq1
1248bp
PREDICTED:_translocator_protein-like_isoform_X1_[Papilio_machaon]
GO:0005497 F androgen binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006694 P steroid biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006820 P anion transport
GO:0006821 P chloride transport
GO:0006869 P lipid transport
GO:0006915 P apoptotic process
GO:0007268 P chemical synaptic transmission
GO:0007568 P aging
GO:0008202 P steroid metabolic process
GO:0008283 P cell population proliferation
GO:0008347 P glial cell migration
GO:0008503 F benzodiazepine receptor activity
GO:0010042 P response to manganese ion
GO:0010266 P response to vitamin B1
GO:0010823 P negative regulation of mitochondrion organization
GO:0010940 P positive regulation of necrotic cell death
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030325 P adrenal gland development
GO:0031397 P negative regulation of protein ubiquitination
GO:0031965 C nuclear membrane
GO:0031966 C mitochondrial membrane
GO:0032374 P regulation of cholesterol transport
GO:0032570 P response to progesterone
GO:0032720 P negative regulation of tumor necrosis factor production
GO:0033574 P response to testosterone
GO:0042493 P response to xenobiotic stimulus
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0044325 F transmembrane transporter binding
GO:0045019 P negative regulation of nitric oxide biosynthetic process
GO:0048265 P response to pain
GO:0048266 P behavioral response to pain
GO:0048678 P response to axon injury
GO:0050810 P regulation of steroid biosynthetic process
GO:0051901 P positive regulation of mitochondrial depolarization
GO:0051928 P positive regulation of calcium ion transport
GO:0060242 P contact inhibition
GO:0060252 P positive regulation of glial cell proliferation
GO:0060253 P negative regulation of glial cell proliferation
GO:0070062 C extracellular exosome
GO:0071222 P cellular response to lipopolysaccharide
GO:0071294 P cellular response to zinc ion
GO:0071476 P cellular hypotonic response
GO:0072655 P establishment of protein localization to mitochondrion
GO:0072656 P maintenance of protein location in mitochondrion
GO:0098794 C postsynapse
GO:0099565 P chemical synaptic transmission, postsynaptic
GO:1903147 P negative regulation of autophagy of mitochondrion
GO:1903579 P negative regulation of ATP metabolic process
GO:2000379 P positive regulation of reactive oxygen species metabolic process
FPKM:105.55 TPM:97.74
2807 A_BomaMG_comp12980_c0_seq1
1879bp
Protein_Red_[Papilio_xuthus]
GO:0005634 C nucleus
FPKM:4.03 TPM:3.73
2808 A_BomaMG_comp12982_c0_seq1
445bp
Uncharacterized_protein_OBRU01_25064_[Operophtera_brumata]
FPKM:7.72 TPM:7.15
2809 A_BomaMG_comp12983_c0_seq1
1238bp
PREDICTED:_tripeptidyl-peptidase_2_isoform_X2_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0008238 F exopeptidase activity
GO:0008240 F tripeptidyl-peptidase activity
GO:0016787 F hydrolase activity
GO:0051260 P protein homooligomerization
FPKM:4.00 TPM:3.71
2810 A_BomaMG_comp12985_c0_seq1
425bp
PREDICTED:_putative_uncharacterized_protein_FLJ37770_[Stomoxys_calcitrans]
FPKM:2.78 TPM:2.58
2811 A_BomaMG_comp12985_c1_seq1
533bp
FPKM:2.70 TPM:2.50
2812 A_BomaMG_comp12986_c0_seq1
1449bp
FPKM:4.27 TPM:3.95
2813 A_BomaMG_comp1298_c0_seq1
271bp
retroelement_polyprotein_[Lasius_niger]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.84 TPM:1.70
2814 A_BomaMG_comp129901_c0_seq1
615bp
BRO-like_protein_[Armadillidium_vulgare_iridescent_virus]
FPKM:0.94 TPM:0.87
2815 A_BomaMG_comp12990_c0_seq1
1448bp
putative_Lysosomal_Pro-X_carboxypeptidase_[Danaus_plexippus]
GO:0004180 F carboxypeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:6.25 TPM:5.79
2816 A_BomaMG_comp12991_c0_seq1
1535bp
PREDICTED:_U4/U6.U5_tri-snRNP-associated_protein_2_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016579 P protein deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0051301 P cell division
FPKM:4.92 TPM:4.56
2817 A_BomaMG_comp12993_c0_seq1
255bp
amino_acid_ABC_transporter_permease_[Bradyrhizobium_sp._YR681]
FPKM:6.57 TPM:6.08
2818 A_BomaMG_comp12994_c0_seq1
826bp
FPKM:4.31 TPM:3.99
2819 A_BomaMG_comp12994_c1_seq1
201bp
FPKM:2.11 TPM:1.96
2820 A_BomaMG_comp12995_c0_seq1
3636bp
PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_rpc2_[Amyelois_transitella]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032549 F ribonucleoside binding
GO:0046872 F metal ion binding
FPKM:4.12 TPM:3.82
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