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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2701 A_BomaMG_comp12874_c0_seq1
876bp
PREDICTED:_uncharacterized_protein_LOC101735688_[Bombyx_mori]
FPKM:4.87 TPM:4.51
2702 A_BomaMG_comp12875_c0_seq1
1200bp
PREDICTED:_DNA/RNA-binding_protein_KIN17-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0016363 C nuclear matrix
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
FPKM:4.45 TPM:4.12
2703 A_BomaMG_comp12876_c0_seq1
732bp
PREDICTED:_oligosaccharyltransferase_complex_subunit_ostc-A-like_[Plutella_xylostella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:91.36 TPM:84.60
2704 A_BomaMG_comp12877_c0_seq1
668bp
FPKM:26.81 TPM:24.83
2705 A_BomaMG_comp12878_c0_seq1
542bp
NADPH_oxidoreductase_[Bombyx_mori]
FPKM:3.57 TPM:3.31
2706 A_BomaMG_comp12880_c0_seq1
1895bp
hypothetical_protein_KGM_04656_[Danaus_plexippus]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
FPKM:4.44 TPM:4.11
2707 A_BomaMG_comp12880_c0_seq2
1801bp
PREDICTED:_survival_of_motor_neuron-related-splicing_factor_30_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
FPKM:0.76 TPM:0.70
2708 A_BomaMG_comp128836_c0_seq1
642bp
FPKM:2.35 TPM:2.18
2709 A_BomaMG_comp12883_c0_seq1
1301bp
PREDICTED:_diacylglycerol_kinase_theta_isoform_X6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0019900 F kinase binding
GO:0019933 P cAMP-mediated signaling
GO:0033198 P response to ATP
GO:0033613 F DNA-binding transcription factor binding
GO:0035556 P intracellular signal transduction
GO:0043274 F phospholipase binding
GO:0046872 F metal ion binding
GO:0070493 P thrombin-activated receptor signaling pathway
GO:0070528 P protein kinase C signaling
FPKM:2.38 TPM:2.21
2710 A_BomaMG_comp12883_c0_seq2
1286bp
PREDICTED:_diacylglycerol_kinase_theta_isoform_X6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0019900 F kinase binding
GO:0019933 P cAMP-mediated signaling
GO:0033198 P response to ATP
GO:0033613 F DNA-binding transcription factor binding
GO:0035556 P intracellular signal transduction
GO:0043274 F phospholipase binding
GO:0046872 F metal ion binding
GO:0070493 P thrombin-activated receptor signaling pathway
GO:0070528 P protein kinase C signaling
FPKM:0.71 TPM:0.66
2711 A_BomaMG_comp12885_c0_seq1
963bp
PREDICTED:_tyrosine-protein_phosphatase_69D_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004728 F obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0023014 P signal transduction
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
FPKM:3.98 TPM:3.69
2712 A_BomaMG_comp12885_c1_seq1
736bp
PREDICTED:_myotubularin-related_protein_3_isoform_X3_[Takifugu_rubripes]
FPKM:5.13 TPM:4.75
2713 A_BomaMG_comp12886_c0_seq1
1310bp
FPKM:4.11 TPM:3.80
2714 A_BomaMG_comp128878_c0_seq1
1551bp
acyl-CoA_desaturase-like_[Bombyx_mori]
GO:0004768 F stearoyl-CoA 9-desaturase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006636 P unsaturated fatty acid biosynthetic process
GO:0006641 P triglyceride metabolic process
GO:0008610 P lipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0032896 F palmitoyl-CoA 9-desaturase activity
GO:0033561 P regulation of water loss via skin
GO:0034434 P sterol esterification
GO:0034435 P cholesterol esterification
GO:0043231 C intracellular membrane-bounded organelle
GO:0044130 P obsolete negative regulation of growth of symbiont in host
GO:0046872 F metal ion binding
GO:0048733 P sebaceous gland development
GO:0050830 P defense response to Gram-positive bacterium
GO:0050872 P white fat cell differentiation
GO:0050873 P brown fat cell differentiation
GO:0055114 P obsolete oxidation-reduction process
GO:0070542 P response to fatty acid
GO:1903699 P tarsal gland development
GO:1903966 P monounsaturated fatty acid biosynthetic process
FPKM:2.05 TPM:1.90
2715 A_BomaMG_comp12888_c0_seq1
885bp
FPKM:1.73 TPM:1.60
2716 A_BomaMG_comp1288_c0_seq1
399bp
PREDICTED:_exportin-4-like_[Bombyx_mori]
FPKM:1.40 TPM:1.30
2717 A_BomaMG_comp12890_c0_seq1
1329bp
PREDICTED:_AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030137 C COPI-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
FPKM:4.75 TPM:4.40
2718 A_BomaMG_comp128913_c0_seq1
325bp
FPKM:1.65 TPM:1.52
2719 A_BomaMG_comp128929_c0_seq1
239bp
FPKM:2.69 TPM:2.49
2720 A_BomaMG_comp12892_c0_seq1
912bp
PREDICTED:_catenin_delta-2_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005912 C adherens junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0008013 F beta-catenin binding
GO:0014069 C postsynaptic density
GO:0016055 P Wnt signaling pathway
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043204 C perikaryon
GO:0050808 P synapse organization
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0060997 P dendritic spine morphogenesis
FPKM:3.60 TPM:3.34
2721 A_BomaMG_comp12893_c0_seq1
1052bp
PREDICTED:_WAS_protein_family_homolog_1-like_[Amyelois_transitella]
GO:0003779 F actin binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0031901 C early endosome membrane
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043014 F alpha-tubulin binding
GO:0055037 C recycling endosome
GO:0055038 C recycling endosome membrane
GO:0071203 C WASH complex
FPKM:1.90 TPM:1.76
2722 A_BomaMG_comp12893_c0_seq2
5131bp
PREDICTED:_LOW_QUALITY_PROTEIN:_cytokine_receptor_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006955 P immune response
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007350 P blastoderm segmentation
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007442 P hindgut morphogenesis
GO:0007616 P long-term memory
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0019955 F cytokine binding
GO:0042981 P regulation of apoptotic process
GO:0045475 P locomotor rhythm
GO:0045824 P negative regulation of innate immune response
GO:0046982 F protein heterodimerization activity
GO:0050829 P defense response to Gram-negative bacterium
GO:0060429 P epithelium development
FPKM:2.87 TPM:2.66
2723 A_BomaMG_comp12894_c0_seq1
600bp
PREDICTED:_60S_ribosome_subunit_biogenesis_protein_NIP7_homolog_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
FPKM:6.07 TPM:5.62
2724 A_BomaMG_comp128956_c0_seq1
1380bp
PREDICTED:_methenyltetrahydrofolate_synthase_domain-containing_protein_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0044822 F RNA binding
FPKM:2.12 TPM:1.96
2725 A_BomaMG_comp12895_c0_seq1
1141bp
PREDICTED:_GTPase-activating_protein_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
FPKM:0.41 TPM:0.38
2726 A_BomaMG_comp12895_c0_seq2
1055bp
PREDICTED:_GTPase-activating_protein_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
FPKM:3.19 TPM:2.96
2727 A_BomaMG_comp12896_c0_seq1
380bp
FPKM:19.12 TPM:17.70
2728 A_BomaMG_comp12897_c0_seq1
1144bp
PREDICTED:_uncharacterized_protein_LOC105841395_isoform_X1_[Bombyx_mori]
FPKM:4.63 TPM:4.29
2729 A_BomaMG_comp12897_c0_seq2
1215bp
PREDICTED:_uncharacterized_protein_LOC105841395_isoform_X1_[Bombyx_mori]
FPKM:0.57 TPM:0.53
2730 A_BomaMG_comp12900_c0_seq1
1986bp
PREDICTED:_SH3_domain-containing_protein_19_isoform_X1_[Papilio_xuthus]
GO:0005515 F protein binding
FPKM:1.49 TPM:1.38
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