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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2641 A_BomaMG_comp12804_c0_seq1
612bp
PREDICTED:_hsp70-binding_protein_1_[Amyelois_transitella]
FPKM:1.51 TPM:1.40
2642 A_BomaMG_comp12804_c0_seq2
837bp
PREDICTED:_hsp70-binding_protein_1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006417 P regulation of translation
FPKM:4.89 TPM:4.53
2643 A_BomaMG_comp12805_c0_seq1
2467bp
FPKM:5.21 TPM:4.82
2644 A_BomaMG_comp12807_c0_seq1
1890bp
FPKM:4.49 TPM:4.16
2645 A_BomaMG_comp12809_c0_seq1
425bp
FPKM:6.13 TPM:5.67
2646 A_BomaMG_comp1280_c0_seq1
392bp
FPKM:1.77 TPM:1.64
2647 A_BomaMG_comp12811_c0_seq1
1022bp
PREDICTED:_LOW_QUALITY_PROTEIN:_bromodomain-containing_protein_4-like_[Bombyx_mori]
FPKM:4.71 TPM:4.36
2648 A_BomaMG_comp12813_c0_seq1
1219bp
PREDICTED:_OTU_domain-containing_protein_6B_[Plutella_xylostella]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
FPKM:5.54 TPM:5.13
2649 A_BomaMG_comp12814_c0_seq1
708bp
FPKM:1.99 TPM:1.85
2650 A_BomaMG_comp12814_c1_seq1
639bp
FPKM:7.03 TPM:6.51
2651 A_BomaMG_comp12816_c0_seq1
247bp
PREDICTED:_ribosome-binding_protein_1_isoform_X1_[Bombyx_mori]
FPKM:15.95 TPM:14.77
2652 A_BomaMG_comp12817_c0_seq1
921bp
RWD_domain-containing_protein_2A_[Operophtera_brumata]
FPKM:4.44 TPM:4.11
2653 A_BomaMG_comp12818_c0_seq1
1206bp
PREDICTED:_serine/threonine-protein_kinase_GA29083_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
FPKM:5.12 TPM:4.74
2654 A_BomaMG_comp12820_c0_seq1
2285bp
hypothetical_protein_KGM_12813_[Danaus_plexippus]
GO:0009306 P protein secretion
GO:0012505 C endomembrane system
GO:0016192 P vesicle-mediated transport
FPKM:3.99 TPM:3.69
2655 A_BomaMG_comp12822_c0_seq1
627bp
hypothetical_protein_KGM_08437_[Danaus_plexippus]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0016020 C membrane
GO:0042493 P response to xenobiotic stimulus
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:100.00 TPM:92.60
2656 A_BomaMG_comp12824_c0_seq1
294bp
FPKM:10.01 TPM:9.27
2657 A_BomaMG_comp12825_c0_seq1
2545bp
PREDICTED:_U3_small_nucleolar_RNA-associated_protein_14_homolog_A_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
FPKM:3.58 TPM:3.31
2658 A_BomaMG_comp12826_c0_seq1
1795bp
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_son_of_sevenless_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007015 P actin filament organization
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008293 P torso signaling pathway
GO:0008360 P regulation of cell shape
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016199 P axon midline choice point recognition
GO:0030154 P cell differentiation
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035022 P positive regulation of Rac protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0045500 P sevenless signaling pathway
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046982 F protein heterodimerization activity
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
FPKM:4.28 TPM:3.96
2659 A_BomaMG_comp12827_c0_seq1
284bp
FPKM:4.22 TPM:3.90
2660 A_BomaMG_comp1282_c0_seq1
221bp
FPKM:0.00 TPM:0.00
2661 A_BomaMG_comp12830_c0_seq1
498bp
BCP_inhibitor_precursor_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:21.53 TPM:19.94
2662 A_BomaMG_comp12831_c0_seq1
2687bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105287085_[Cerapachys_biroi]
FPKM:2.49 TPM:2.31
2663 A_BomaMG_comp12833_c0_seq1
1057bp
PREDICTED:_methyltransferase-like_protein_isoform_X2_[Papilio_machaon]
GO:0008168 F methyltransferase activity
GO:0016427 F tRNA (cytosine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
FPKM:4.91 TPM:4.55
2664 A_BomaMG_comp12834_c0_seq1
1425bp
PREDICTED:_synembryn_[Bombyx_mori]
GO:0001965 F G-protein alpha-subunit binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008105 P protein localization
GO:0008356 P asymmetric cell division
GO:0010004 P gastrulation involving germ band extension
GO:0040001 P establishment of mitotic spindle localization
GO:0043547 P positive regulation of GTPase activity
GO:0050821 P protein stabilization
GO:0055057 P neuroblast division
FPKM:3.62 TPM:3.35
2665 A_BomaMG_comp12835_c0_seq1
901bp
FPKM:4.38 TPM:4.05
2666 A_BomaMG_comp12837_c0_seq1
388bp
PREDICTED:_U6_snRNA-associated_Sm-like_protein_LSm6_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0005730 C nucleolus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006402 P mRNA catabolic process
GO:0008033 P tRNA processing
GO:0008380 P RNA splicing
GO:0030490 P maturation of SSU-rRNA
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0046982 F protein heterodimerization activity
GO:0070062 C extracellular exosome
FPKM:8.37 TPM:7.75
2667 A_BomaMG_comp12838_c0_seq1
537bp
FPKM:4.48 TPM:4.15
2668 A_BomaMG_comp12839_c0_seq1
1218bp
PREDICTED:_ribosome_biogenesis_protein_BRX1_homolog_[Papilio_polytes]
GO:0000027 P ribosomal large subunit assembly
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
FPKM:5.22 TPM:4.84
2669 A_BomaMG_comp128401_c0_seq1
1843bp
PREDICTED:_ATP-dependent_RNA_helicase_DBP9_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
FPKM:2.52 TPM:2.34
2670 A_BomaMG_comp12840_c0_seq1
952bp
PREDICTED:_squamous_cell_carcinoma_antigen_recognized_by_T-cells_3_[Papilio_xuthus]
FPKM:3.95 TPM:3.66
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