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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2611 A_BomaMG_comp12772_c0_seq1
359bp
FPKM:3.05 TPM:2.83
2612 A_BomaMG_comp127739_c0_seq1
985bp
FPKM:1.98 TPM:1.83
2613 A_BomaMG_comp12773_c0_seq1
578bp
FPKM:5.21 TPM:4.82
2614 A_BomaMG_comp12775_c0_seq1
751bp
FPKM:2.85 TPM:2.64
2615 A_BomaMG_comp12775_c1_seq1
1879bp
PREDICTED:_AP-3_complex_subunit_mu-1_[Amyelois_transitella]
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030131 C clathrin adaptor complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
FPKM:5.34 TPM:4.95
2616 A_BomaMG_comp12778_c0_seq1
1603bp
PREDICTED:_WD_repeat-containing_protein_43_[Bombyx_mori]
GO:0000003 P reproduction
GO:0000132 P establishment of mitotic spindle orientation
GO:0000776 C kinetochore
GO:0001650 C fibrillar center
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005813 C centrosome
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006364 P rRNA processing
GO:0007097 P nuclear migration
GO:0008017 F microtubule binding
GO:0031023 P microtubule organizing center organization
GO:0044822 F RNA binding
GO:0045502 F dynein complex binding
GO:0047496 P vesicle transport along microtubule
GO:2000574 P obsolete regulation of microtubule motor activity
FPKM:4.63 TPM:4.29
2617 A_BomaMG_comp12778_c0_seq2
226bp
PREDICTED:_WD_repeat-containing_protein_43_[Bombyx_mori]
FPKM:1.54 TPM:1.43
2618 A_BomaMG_comp12779_c0_seq1
1818bp
glycosyltransferase_precursor_[Bombyx_mori]
GO:0001744 P insect visual primordium formation
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0007411 P axon guidance
GO:0008049 P male courtship behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0019187 F beta-1,4-mannosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0033227 P dsRNA transport
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0045165 P cell fate commitment
GO:0045434 P negative regulation of female receptivity, post-mating
GO:0046662 P regulation of oviposition
GO:0048477 P oogenesis
GO:0048935 P peripheral nervous system neuron development
GO:0097502 P mannosylation
FPKM:5.95 TPM:5.51
2619 A_BomaMG_comp1277_c0_seq1
334bp
PREDICTED:_glutathione_S-transferase_unclassified_1_isoform_X1_[Bombyx_mori]
FPKM:1.55 TPM:1.44
2620 A_BomaMG_comp12781_c0_seq1
1467bp
PREDICTED:_alpha-amylase_2-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006567 P threonine catabolic process
GO:0008152 P metabolic process
GO:0008890 F glycine C-acetyltransferase activity
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019518 P L-threonine catabolic process to glycine
GO:0030170 F pyridoxal phosphate binding
FPKM:5.34 TPM:4.95
2621 A_BomaMG_comp127820_c0_seq1
590bp
FPKM:1.91 TPM:1.77
2622 A_BomaMG_comp12783_c0_seq1
1427bp
hypothetical_protein_RR46_13726_[Papilio_xuthus]
FPKM:4.54 TPM:4.20
2623 A_BomaMG_comp12784_c0_seq1
1526bp
PREDICTED:_kelch-like_ECH-associated_protein_1_[Papilio_polytes]
GO:0001701 P in utero embryonic development
GO:0001887 P selenium compound metabolic process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005884 C actin filament
GO:0005913 C adherens junction
GO:0005925 C focal adhesion
GO:0006108 P malate metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0009812 P flavonoid metabolic process
GO:0010038 P response to metal ion
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010629 P negative regulation of gene expression
GO:0016567 P protein ubiquitination
GO:0019694 P alkanesulfonate metabolic process
GO:0030496 C midbody
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0035902 P response to immobilization stress
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045604 P regulation of epidermal cell differentiation
GO:0051259 P protein complex oligomerization
GO:0071353 P cellular response to interleukin-4
GO:0071407 P cellular response to organic cyclic compound
GO:0097066 P response to thyroid hormone
FPKM:4.90 TPM:4.54
2624 A_BomaMG_comp12784_c0_seq2
1486bp
PREDICTED:_kelch-like_ECH-associated_protein_1_[Papilio_polytes]
GO:0001701 P in utero embryonic development
GO:0001887 P selenium compound metabolic process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005884 C actin filament
GO:0005913 C adherens junction
GO:0005925 C focal adhesion
GO:0006108 P malate metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0009812 P flavonoid metabolic process
GO:0010038 P response to metal ion
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010629 P negative regulation of gene expression
GO:0016567 P protein ubiquitination
GO:0019694 P alkanesulfonate metabolic process
GO:0030496 C midbody
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0035902 P response to immobilization stress
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045604 P regulation of epidermal cell differentiation
GO:0051259 P protein complex oligomerization
GO:0071353 P cellular response to interleukin-4
GO:0071407 P cellular response to organic cyclic compound
GO:0097066 P response to thyroid hormone
FPKM:0.88 TPM:0.82
2625 A_BomaMG_comp12786_c0_seq1
3178bp
PREDICTED:_uncharacterized_protein_LOC106648510_[Trichogramma_pretiosum]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.79 TPM:4.43
2626 A_BomaMG_comp12787_c0_seq1
603bp
FPKM:3.54 TPM:3.28
2627 A_BomaMG_comp12789_c0_seq1
695bp
FPKM:5.15 TPM:4.77
2628 A_BomaMG_comp12791_c0_seq1
2683bp
PREDICTED:_F-box-like/WD_repeat-containing_protein_TBL1XR1_[Amyelois_transitella]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0002021 P response to dietary excess
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005876 C spindle microtubule
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008013 F beta-catenin binding
GO:0010468 P regulation of gene expression
GO:0016042 P lipid catabolic process
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0017053 C transcription repressor complex
GO:0030814 P obsolete regulation of cAMP metabolic process
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0047485 F protein N-terminus binding
GO:0050872 P white fat cell differentiation
GO:0060070 P canonical Wnt signaling pathway
GO:0060612 P adipose tissue development
GO:0060613 P fat pad development
GO:0090207 P regulation of triglyceride metabolic process
FPKM:5.48 TPM:5.07
2629 A_BomaMG_comp12792_c0_seq1
468bp
hypothetical_protein_I79_005595_[Cricetulus_griseus]
FPKM:5.68 TPM:5.26
2630 A_BomaMG_comp12793_c0_seq1
1982bp
FPKM:4.98 TPM:4.61
2631 A_BomaMG_comp12794_c0_seq1
265bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:4.30 TPM:3.99
2632 A_BomaMG_comp12796_c0_seq1
957bp
Zinc_finger_protein_GLIS2-like_protein_[Operophtera_brumata]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016607 C nuclear speck
GO:0031670 P cellular response to nutrient
GO:0042594 P response to starvation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
FPKM:1.84 TPM:1.71
2633 A_BomaMG_comp12796_c0_seq2
1305bp
PREDICTED:_zinc_finger_protein_GLIS3-like_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016607 C nuclear speck
GO:0031670 P cellular response to nutrient
GO:0042594 P response to starvation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
FPKM:4.24 TPM:3.93
2634 A_BomaMG_comp12797_c0_seq1
1985bp
guanylate_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004385 F guanylate kinase activity
GO:0005524 F ATP binding
GO:0006163 P purine nucleotide metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
FPKM:4.54 TPM:4.20
2635 A_BomaMG_comp12798_c0_seq1
1141bp
mod(mdg4)_protein_[Helicoverpa_armigera]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
FPKM:5.73 TPM:5.31
2636 A_BomaMG_comp12798_c0_seq2
408bp
PREDICTED:_longitudinals_lacking_protein-like_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
FPKM:0.67 TPM:0.62
2637 A_BomaMG_comp12799_c0_seq1
635bp
PREDICTED:_lysine-specific_demethylase_lid_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
FPKM:3.51 TPM:3.25
2638 A_BomaMG_comp1279_c0_seq1
585bp
FPKM:1.09 TPM:1.01
2639 A_BomaMG_comp12800_c0_seq1
3247bp
PREDICTED:_engulfment_and_cell_motility_protein_1_[Amyelois_transitella]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0006911 P phagocytosis, engulfment
GO:0006915 P apoptotic process
GO:0006928 P movement of cell or subcellular component
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0016601 P Rac protein signal transduction
GO:0017124 F SH3 domain binding
GO:0030029 P actin filament-based process
GO:0030036 P actin cytoskeleton organization
GO:0032045 C guanyl-nucleotide exchange factor complex
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0043547 P positive regulation of GTPase activity
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0050690 P regulation of defense response to virus by virus
FPKM:4.43 TPM:4.10
2640 A_BomaMG_comp12802_c0_seq1
317bp
FPKM:6.21 TPM:5.75
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