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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2581 A_BomaMG_comp12740_c0_seq1
910bp
PREDICTED:_uncharacterized_protein_LOC101740766_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:6.65 TPM:6.15
2582 A_BomaMG_comp12741_c0_seq1
1573bp
Actin_binding_protein,_partial_[Operophtera_brumata]
FPKM:5.69 TPM:5.27
2583 A_BomaMG_comp12743_c0_seq1
505bp
PREDICTED:_E3_ubiquitin-protein_ligase_RNF180-like_[Plutella_xylostella]
GO:0000209 P protein polyubiquitination
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030534 P adult behavior
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031398 P positive regulation of protein ubiquitination
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042415 P norepinephrine metabolic process
GO:0042428 P serotonin metabolic process
GO:0046872 F metal ion binding
GO:0050790 P regulation of catalytic activity
GO:0061630 F ubiquitin protein ligase activity
GO:1901360 P organic cyclic compound metabolic process
FPKM:7.96 TPM:7.37
2584 A_BomaMG_comp12744_c0_seq1
550bp
PREDICTED:_uncharacterized_protein_LOC105206448,_partial_[Solenopsis_invicta]
FPKM:1.93 TPM:1.79
2585 A_BomaMG_comp12745_c0_seq1
2016bp
PREDICTED:_rRNA_2'-O-methyltransferase_fibrillarin_[Papilio_machaon]
GO:0001651 C dense fibrillar component
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030529 C ribonucleoprotein complex
GO:0032259 P methylation
FPKM:5.70 TPM:5.27
2586 A_BomaMG_comp12747_c0_seq1
1039bp
PREDICTED:_chymotrypsin-2-like_[Papilio_xuthus]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:159.47 TPM:147.66
2587 A_BomaMG_comp12748_c0_seq1
297bp
transportin2-like_protein_[Leptomonas_pyrrhocoris]
FPKM:5.51 TPM:5.10
2588 A_BomaMG_comp12749_c0_seq1
1136bp
PREDICTED:_formin-binding_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0031410 C cytoplasmic vesicle
GO:0042802 F identical protein binding
GO:0043547 P positive regulation of GTPase activity
FPKM:5.67 TPM:5.25
2589 A_BomaMG_comp12750_c0_seq1
401bp
hypothetical_protein_[Penicillium_rubens_Wisconsin_54-1255]
FPKM:1.08 TPM:1.00
2590 A_BomaMG_comp12751_c0_seq1
865bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_32_isoform_X2_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
FPKM:3.42 TPM:3.16
2591 A_BomaMG_comp12753_c0_seq1
1319bp
N-acetyl-glucosamine-6-phosphate_isomerase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
FPKM:12.06 TPM:11.16
2592 A_BomaMG_comp12753_c0_seq2
1366bp
N-acetyl-glucosamine-6-phosphate_isomerase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
FPKM:13.73 TPM:12.71
2593 A_BomaMG_comp12754_c0_seq1
453bp
FPKM:7.87 TPM:7.29
2594 A_BomaMG_comp12755_c0_seq1
2248bp
PREDICTED:_phosphatidylinositol_4-kinase_alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030660 C Golgi-associated vesicle membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
FPKM:5.37 TPM:4.97
2595 A_BomaMG_comp12758_c0_seq1
306bp
hypothetical_protein_[Pseudomonas_chlororaphis]
FPKM:4.05 TPM:3.75
2596 A_BomaMG_comp1275_c0_seq1
284bp
PREDICTED:_uncharacterized_protein_LOC105380799_[Plutella_xylostella]
FPKM:0.65 TPM:0.60
2597 A_BomaMG_comp12760_c0_seq1
2041bp
PREDICTED:_translation_factor_GUF1_homolog,_mitochondrial_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
FPKM:5.58 TPM:5.17
2598 A_BomaMG_comp12761_c0_seq1
1020bp
PREDICTED:_uncharacterized_protein_LOC106132556_[Amyelois_transitella]
FPKM:0.32 TPM:0.29
2599 A_BomaMG_comp12761_c0_seq2
875bp
PREDICTED:_uncharacterized_protein_LOC106132556_[Amyelois_transitella]
FPKM:4.26 TPM:3.94
2600 A_BomaMG_comp127623_c0_seq1
638bp
FPKM:1.78 TPM:1.65
2601 A_BomaMG_comp12762_c0_seq1
880bp
PREDICTED:_KAT8_regulatory_NSL_complex_subunit_1-like_protein_isoform_X1_[Bombyx_mori]
FPKM:2.47 TPM:2.29
2602 A_BomaMG_comp12763_c0_seq1
317bp
FPKM:1.74 TPM:1.61
2603 A_BomaMG_comp12766_c0_seq1
535bp
PREDICTED:_lysophospholipase-like_protein_1_[Bombyx_mori]
GO:0002084 P protein depalmitoylation
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0042997 P negative regulation of Golgi to plasma membrane protein transport
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
2604 A_BomaMG_comp12766_c0_seq2
1044bp
PREDICTED:_lysophospholipase-like_protein_1_[Bombyx_mori]
GO:0002084 P protein depalmitoylation
GO:0004622 F lysophospholipase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
FPKM:5.42 TPM:5.01
2605 A_BomaMG_comp12767_c0_seq1
774bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
FPKM:4.57 TPM:4.23
2606 A_BomaMG_comp12768_c0_seq1
3866bp
PREDICTED:_LIM_domain-containing_protein_jub_[Papilio_machaon]
GO:0000242 C pericentriolar material
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007067 P mitotic cell cycle
GO:0008270 F zinc ion binding
GO:0030054 C cell junction
GO:0030707 P ovarian follicle cell development
GO:0035329 P hippo signaling
GO:0045177 C apical part of cell
GO:0045179 C apical cortex
GO:0045572 P positive regulation of imaginal disc growth
GO:0046622 P positive regulation of organ growth
GO:0046872 F metal ion binding
GO:0071539 P protein localization to centrosome
FPKM:4.58 TPM:4.24
2607 A_BomaMG_comp12769_c0_seq1
1011bp
PREDICTED:_protein_PRRC1-like_[Amyelois_transitella]
GO:0001757 P somite specification
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0010669 P epithelial structure maintenance
GO:0034199 P activation of protein kinase A activity
GO:0034237 F protein kinase A regulatory subunit binding
FPKM:7.10 TPM:6.57
2608 A_BomaMG_comp1276_c0_seq1
264bp
PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_[Bombyx_mori]
FPKM:1.58 TPM:1.47
2609 A_BomaMG_comp1276_c1_seq1
232bp
PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_[Bombyx_mori]
FPKM:1.79 TPM:1.65
2610 A_BomaMG_comp12770_c0_seq1
899bp
Uncharacterized_protein_OBRU01_02105_[Operophtera_brumata]
FPKM:5.99 TPM:5.55
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