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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2521 A_BomaMG_comp12687_c0_seq1
1697bp
PREDICTED:_acetoacetyl-CoA_thiolase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0046872 F metal ion binding
FPKM:140.84 TPM:130.41
2522 A_BomaMG_comp126885_c0_seq1
675bp
FPKM:2.75 TPM:2.54
2523 A_BomaMG_comp12688_c0_seq1
421bp
1,4-beta-D-glucan_cellobiohydrolase_CEL6B_[Neonectria_ditissima]
FPKM:50.82 TPM:47.06
2524 A_BomaMG_comp12689_c0_seq1
1958bp
PREDICTED:_uncharacterized_protein_LOC101735423_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:5.79 TPM:5.36
2525 A_BomaMG_comp1268_c0_seq1
234bp
FPKM:2.31 TPM:2.14
2526 A_BomaMG_comp12690_c0_seq1
777bp
hypothetical_protein_SBOR_6948_[Sclerotinia_borealis_F-4157]
FPKM:5.92 TPM:5.48
2527 A_BomaMG_comp12691_c0_seq1
487bp
FPKM:6.33 TPM:5.86
2528 A_BomaMG_comp12692_c0_seq1
246bp
FPKM:7.34 TPM:6.80
2529 A_BomaMG_comp12693_c0_seq1
470bp
FPKM:1.76 TPM:1.63
2530 A_BomaMG_comp12695_c0_seq1
1421bp
PREDICTED:_DNA_polymerase_delta_subunit_2_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0043625 C delta DNA polymerase complex
GO:0071897 P DNA biosynthetic process
FPKM:6.47 TPM:5.99
2531 A_BomaMG_comp12695_c1_seq1
340bp
FPKM:1.28 TPM:1.18
2532 A_BomaMG_comp12697_c0_seq1
1899bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_calypso_isoform_X2_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
FPKM:0.20 TPM:0.19
2533 A_BomaMG_comp12697_c0_seq2
1871bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_calypso_isoform_X2_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
FPKM:4.78 TPM:4.42
2534 A_BomaMG_comp12698_c0_seq1
320bp
dNA_helicase_[Fusobacterium_sp._CAG:649]
FPKM:4.38 TPM:4.05
2535 A_BomaMG_comp12699_c0_seq1
242bp
PREDICTED:_signal_transducing_adapter_molecule_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:1903543 P positive regulation of exosomal secretion
GO:1903551 P regulation of extracellular exosome assembly
FPKM:4.56 TPM:4.23
2536 A_BomaMG_comp12699_c0_seq2
279bp
PREDICTED:_signal_transducing_adapter_molecule_2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
FPKM:10.93 TPM:10.12
2537 A_BomaMG_comp1269_c0_seq1
406bp
PREDICTED:_protein_disabled_[Bombyx_mori]
FPKM:1.06 TPM:0.98
2538 A_BomaMG_comp1269_c1_seq1
347bp
PREDICTED:_protein_disabled_[Bombyx_mori]
FPKM:1.02 TPM:0.95
2539 A_BomaMG_comp126_c0_seq1
270bp
FPKM:0.74 TPM:0.69
2540 A_BomaMG_comp12701_c0_seq1
861bp
PREDICTED:_tigger_transposable_element-derived_protein_1-like_[Megachile_rotundata]
GO:0003677 F DNA binding
GO:0005634 C nucleus
FPKM:6.38 TPM:5.91
2541 A_BomaMG_comp12702_c0_seq1
721bp
p23-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0031965 C nuclear membrane
FPKM:77.15 TPM:71.44
2542 A_BomaMG_comp127059_c0_seq1
468bp
PREDICTED:_disheveled-associated_activator_of_morphogenesis_1_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0042802 F identical protein binding
FPKM:2.96 TPM:2.74
2543 A_BomaMG_comp12706_c0_seq1
1106bp
PREDICTED:_probable_tRNA_N6-adenosine_threonylcarbamoyltransferase_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0046872 F metal ion binding
GO:0061711 F N(6)-L-threonylcarbamoyladenine synthase activity
FPKM:5.82 TPM:5.39
2544 A_BomaMG_comp12707_c0_seq1
651bp
hypothetical_protein_SPAPADRAFT_60443_[Spathaspora_passalidarum_NRRL_Y-27907]
FPKM:2.81 TPM:2.61
2545 A_BomaMG_comp127086_c0_seq1
1520bp
Uncharacterized_protein_OBRU01_06377_[Operophtera_brumata]
FPKM:1.92 TPM:1.78
2546 A_BomaMG_comp12709_c0_seq1
2846bp
PREDICTED:_cysteine_protease_ATG4B_isoform_X1_[Amyelois_transitella]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
FPKM:4.27 TPM:3.95
2547 A_BomaMG_comp1270_c0_seq1
336bp
hypothetical_protein_TRIADDRAFT_1077_[Trichoplax_adhaerens]
FPKM:0.66 TPM:0.61
2548 A_BomaMG_comp12710_c0_seq1
1831bp
PREDICTED:_probable_dolichyl_pyrophosphate_Glc1Man9GlcNAc2_alpha-1,3-glucosyltransferase_[Amyelois_transitella]
GO:0000033 F alpha-1,3-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0006490 P oligosaccharide-lipid intermediate biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0042281 F dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0097502 P mannosylation
FPKM:5.09 TPM:4.71
2549 A_BomaMG_comp127126_c0_seq1
609bp
hypothetical_protein_PPL_11736_[Polysphondylium_pallidum_PN500]
FPKM:2.46 TPM:2.28
2550 A_BomaMG_comp12712_c0_seq1
1952bp
PREDICTED:_membrane_protein_TMS1_isoform_X2_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0015194 F L-serine transmembrane transporter activity
GO:0015825 P L-serine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:41.87 TPM:38.77
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