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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2401 A_BomaMG_comp1254_c1_seq1
382bp
PREDICTED:_uncharacterized_protein_LOC104118631_[Nicotiana_tomentosiformis]
FPKM:1.18 TPM:1.10
2402 A_BomaMG_comp12551_c0_seq1
507bp
putative_NADH:ubiquinone_dehydrogenase_[Danaus_plexippus]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0005751 C mitochondrial respiratory chain complex IV
GO:0016020 C membrane
GO:0032403 F protein-containing complex binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070469 C respirasome
GO:1902600 P proton transmembrane transport
FPKM:694.61 TPM:643.19
2403 A_BomaMG_comp125525_c0_seq1
281bp
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:1.67 TPM:1.54
2404 A_BomaMG_comp12552_c0_seq1
605bp
40S_ribosomal_protein_S14_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
FPKM:689.97 TPM:638.89
2405 A_BomaMG_comp125547_c0_seq1
214bp
hypothetical_protein_[Frankia_sp._CN3]
FPKM:0.81 TPM:0.75
2406 A_BomaMG_comp12554_c0_seq1
206bp
FPKM:14.97 TPM:13.86
2407 A_BomaMG_comp12554_c0_seq2
249bp
FPKM:38.25 TPM:35.42
2408 A_BomaMG_comp12555_c0_seq1
1209bp
PREDICTED:_tetratricopeptide_repeat_protein_19_homolog,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0007630 P jump response
GO:0034551 P mitochondrial respiratory chain complex III assembly
GO:0071632 P optomotor response
GO:0097033 P obsolete mitochondrial respiratory chain complex III biogenesis
FPKM:35.07 TPM:32.48
2409 A_BomaMG_comp12558_c0_seq1
922bp
ubiquinol-cytochrome_C_reductase_complex_14kD_subunit_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005750 C mitochondrial respiratory chain complex III
GO:0006122 P mitochondrial electron transport, ubiquinol to cytochrome c
GO:0008121 F ubiquinol-cytochrome-c reductase activity
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0034551 P mitochondrial respiratory chain complex III assembly
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:1902600 P proton transmembrane transport
FPKM:259.22 TPM:240.03
2410 A_BomaMG_comp12561_c0_seq1
791bp
PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_FKBP2_[Amyelois_transitella]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005528 F FK506 binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016853 F isomerase activity
GO:0061077 P chaperone-mediated protein folding
GO:0070062 C extracellular exosome
FPKM:34.56 TPM:32.00
2411 A_BomaMG_comp12565_c0_seq1
1278bp
26S_proteasome_non-ATPase_regulatory_subunit_14_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0005838 C proteasome regulatory particle
GO:0005875 C microtubule associated complex
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008541 C proteasome regulatory particle, lid subcomplex
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:35.70 TPM:33.06
2412 A_BomaMG_comp12568_c0_seq1
939bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_28_homolog_[Bombyx_mori]
GO:0000813 C ESCRT I complex
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0006914 P autophagy
GO:0007291 P sperm individualization
GO:0007293 P germarium-derived egg chamber formation
GO:0008593 P regulation of Notch signaling pathway
GO:0009792 P embryo development ending in birth or egg hatching
GO:0010796 P regulation of multivesicular body size
GO:0015031 P protein transport
GO:0030036 P actin cytoskeleton organization
GO:0030713 P ovarian follicle cell stalk formation
GO:0032403 F protein-containing complex binding
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043328 P protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0044130 P obsolete negative regulation of growth of symbiont in host
GO:0048749 P compound eye development
GO:0060429 P epithelium development
GO:0097352 P autophagosome maturation
FPKM:37.29 TPM:34.53
2413 A_BomaMG_comp1256_c0_seq1
344bp
FPKM:1.46 TPM:1.35
2414 A_BomaMG_comp125717_c0_seq1
203bp
FPKM:2.02 TPM:1.87
2415 A_BomaMG_comp12571_c0_seq1
836bp
PREDICTED:_ER_membrane_protein_complex_subunit_7_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0072546 C EMC complex
FPKM:42.48 TPM:39.33
2416 A_BomaMG_comp12572_c0_seq1
1249bp
FK506-binding_protein_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
FPKM:26.78 TPM:24.80
2417 A_BomaMG_comp125736_c0_seq1
352bp
hypothetical_protein_KFL_000480200_[Klebsormidium_flaccidum]
FPKM:2.98 TPM:2.76
2418 A_BomaMG_comp12575_c0_seq1
1054bp
nonmuscle_myosin_essential_light_chain_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0016459 C myosin complex
GO:0016460 C myosin II complex
GO:0016461 C unconventional myosin complex
GO:0017022 F myosin binding
GO:0030048 P actin filament-based movement
GO:0031475 C myosin V complex
GO:0031476 C myosin VI complex
GO:0031477 C myosin VII complex
GO:0032036 F myosin heavy chain binding
GO:0046872 F metal ion binding
FPKM:131.23 TPM:121.52
2419 A_BomaMG_comp125764_c0_seq1
266bp
FPKM:3.10 TPM:2.87
2420 A_BomaMG_comp12578_c0_seq1
629bp
NADH_dehydrogenase_(ubiquinone)_1_alpha_subcomplex,_13_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006915 P apoptotic process
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030308 P negative regulation of cell growth
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0097190 P apoptotic signaling pathway
GO:0097191 P extrinsic apoptotic signaling pathway
FPKM:356.28 TPM:329.90
2421 A_BomaMG_comp1257_c0_seq1
308bp
PREDICTED:_neuropeptide_receptor_A3_isoform_X1_[Bombyx_mori]
FPKM:1.59 TPM:1.48
2422 A_BomaMG_comp125804_c0_seq1
404bp
FPKM:2.74 TPM:2.54
2423 A_BomaMG_comp12582_c0_seq1
2891bp
PREDICTED:_uncharacterized_protein_LOC106127448_[Papilio_xuthus]
GO:0004177 F aminopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:375.04 TPM:347.27
2424 A_BomaMG_comp12585_c0_seq1
964bp
protein_CREG1_precursor_[Papilio_xuthus]
GO:0003714 F transcription corepressor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005667 C transcription regulator complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0040008 P regulation of growth
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:455.81 TPM:422.06
2425 A_BomaMG_comp12586_c0_seq1
916bp
16_kDa_salivary_protein_[Danaus_plexippus]
GO:0005783 C endoplasmic reticulum
GO:0005784 C Sec61 translocon complex
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:139.14 TPM:128.84
2426 A_BomaMG_comp12587_c0_seq1
1138bp
PREDICTED:_myosin_light_chain_alkali_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005859 C muscle myosin complex
GO:0016459 C myosin complex
FPKM:160.50 TPM:148.62
2427 A_BomaMG_comp125882_c0_seq1
533bp
FPKM:2.70 TPM:2.50
2428 A_BomaMG_comp1258_c0_seq1
400bp
threonine_synthase_[Bordetella_bronchiseptica]
FPKM:0.47 TPM:0.43
2429 A_BomaMG_comp12590_c0_seq1
1051bp
glutathione_S-transferase_omega_1_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0004734 F pyrimidodiazepine synthase activity
GO:0005737 C cytoplasm
GO:0006726 P eye pigment biosynthetic process
GO:0006728 P pteridine biosynthetic process
GO:0006749 P glutathione metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016782 F transferase activity, transferring sulphur-containing groups
GO:0042803 F protein homodimerization activity
GO:0045174 F glutathione dehydrogenase (ascorbate) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:135.87 TPM:125.81
2430 A_BomaMG_comp12591_c0_seq1
2458bp
glutamate_dehydrogenase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004352 F glutamate dehydrogenase (NAD+) activity
GO:0004353 F glutamate dehydrogenase [NAD(P)+] activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006116 P NADH oxidation
GO:0006520 P cellular amino acid metabolic process
GO:0006536 P glutamate metabolic process
GO:0009060 P aerobic respiration
GO:0016491 F oxidoreductase activity
GO:0019551 P glutamate catabolic process to 2-oxoglutarate
GO:0042802 F identical protein binding
GO:0046693 P sperm storage
GO:0055114 P obsolete oxidation-reduction process
FPKM:317.70 TPM:294.18
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