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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2371 A_BomaMG_comp125223_c0_seq1
852bp
FPKM:1.11 TPM:1.03
2372 A_BomaMG_comp12522_c0_seq1
1178bp
PREDICTED:_uncharacterized_protein_LOC106142738_[Amyelois_transitella]
FPKM:42.36 TPM:39.22
2373 A_BomaMG_comp12522_c0_seq2
1108bp
PREDICTED:_uncharacterized_protein_LOC106142738_[Amyelois_transitella]
FPKM:5.63 TPM:5.21
2374 A_BomaMG_comp12523_c0_seq1
1987bp
PREDICTED:_calcium-binding_protein_E63-1_isoform_X1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0035071 P salivary gland cell autophagic cell death
GO:0046872 F metal ion binding
GO:0048102 P autophagic cell death
FPKM:28.29 TPM:26.19
2375 A_BomaMG_comp12524_c0_seq1
586bp
ribosomal_protein_S13_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:740.29 TPM:685.48
2376 A_BomaMG_comp125271_c0_seq1
683bp
FPKM:3.58 TPM:3.31
2377 A_BomaMG_comp125274_c0_seq1
851bp
FPKM:2.12 TPM:1.97
2378 A_BomaMG_comp12527_c0_seq1
1154bp
PREDICTED:_phosphoglucomutase_[Amyelois_transitella]
GO:0000287 F magnesium ion binding
GO:0004614 F phosphoglucomutase activity
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0016853 F isomerase activity
GO:0016868 F intramolecular transferase activity, phosphotransferases
GO:0046872 F metal ion binding
GO:0071704 P organic substance metabolic process
FPKM:51.54 TPM:47.73
2379 A_BomaMG_comp125288_c0_seq1
442bp
PREDICTED:_E3_ubiquitin-protein_ligase_Arkadia-like_[Bombyx_mori]
FPKM:3.51 TPM:3.25
2380 A_BomaMG_comp1252_c0_seq1
392bp
PREDICTED:_uncharacterized_protein_LOC106134519_isoform_X1_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016235 C aggresome
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0035098 C ESC/E(Z) complex
GO:0035518 P histone H2A monoubiquitination
GO:0036353 P histone H2A-K119 monoubiquitination
GO:0042803 F protein homodimerization activity
GO:0046600 P negative regulation of centriole replication
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070842 P aggresome assembly
FPKM:1.13 TPM:1.04
2381 A_BomaMG_comp12530_c0_seq1
704bp
cuticular_protein_RR-1_motif_42_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:5.02 TPM:4.64
2382 A_BomaMG_comp12530_c0_seq2
776bp
cuticular_protein_RR-1_motif_42_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:29.71 TPM:27.51
2383 A_BomaMG_comp125332_c0_seq1
553bp
PREDICTED:_macoilin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0031965 C nuclear membrane
GO:0042995 C cell projection
FPKM:3.19 TPM:2.96
2384 A_BomaMG_comp12533_c0_seq1
1716bp
aspartate_aminotransferase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004069 F L-aspartate:2-oxoglutarate aminotransferase activity
GO:0005543 F phospholipid binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005886 C plasma membrane
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006107 P oxaloacetate metabolic process
GO:0006520 P cellular amino acid metabolic process
GO:0006531 P aspartate metabolic process
GO:0006532 P aspartate biosynthetic process
GO:0006533 P aspartate catabolic process
GO:0006536 P glutamate metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0009986 C cell surface
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016212 F kynurenine-oxoglutarate transaminase activity
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0019550 P glutamate catabolic process to aspartate
GO:0019551 P glutamate catabolic process to 2-oxoglutarate
GO:0019899 F enzyme binding
GO:0030170 F pyridoxal phosphate binding
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043204 C perikaryon
GO:0043209 C myelin sheath
GO:0043234 C protein-containing complex
GO:0043648 P dicarboxylic acid metabolic process
GO:0044822 F RNA binding
GO:0045471 P response to ethanol
GO:0070062 C extracellular exosome
GO:0080130 F L-phenylalanine:2-oxoglutarate aminotransferase activity
GO:0097052 P L-kynurenine metabolic process
FPKM:361.43 TPM:334.67
2385 A_BomaMG_comp125355_c0_seq1
431bp
PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:4.62 TPM:4.28
2386 A_BomaMG_comp12535_c0_seq1
977bp
H+_transporting_ATP_synthase_delta_subunit_[Bombyx_mori]
GO:0000275 C mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005743 C mitochondrial inner membrane
GO:0005753 C mitochondrial proton-transporting ATP synthase complex
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045259 C proton-transporting ATP synthase complex
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:331.49 TPM:306.95
2387 A_BomaMG_comp125388_c0_seq1
644bp
PREDICTED:_ras-related_protein_Rab-24-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0006914 P autophagy
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
FPKM:2.71 TPM:2.51
2388 A_BomaMG_comp12538_c0_seq1
799bp
PREDICTED:_NADH_dehydrogenase_[ubiquinone]_iron-sulfur_protein_4,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0007420 P brain development
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0019933 P cAMP-mediated signaling
GO:0022900 P electron transport chain
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0045333 P cellular respiration
GO:0048146 P positive regulation of fibroblast proliferation
GO:0051591 P response to cAMP
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0072593 P reactive oxygen species metabolic process
FPKM:178.11 TPM:164.92
2389 A_BomaMG_comp12539_c0_seq1
1236bp
PREDICTED:_D-erythrulose_reductase-like_[Papilio_xuthus]
GO:0001669 C acrosomal vesicle
GO:0005881 C cytoplasmic microtubule
GO:0005975 P carbohydrate metabolic process
GO:0005997 P xylulose metabolic process
GO:0006006 P glucose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0031410 C cytoplasmic vesicle
GO:0042732 P D-xylose metabolic process
GO:0050038 F L-xylulose reductase (NADP+) activity
GO:0051289 P protein homotetramerization
GO:0055114 P obsolete oxidation-reduction process
FPKM:42.10 TPM:38.99
2390 A_BomaMG_comp125413_c0_seq1
328bp
PREDICTED:_paired_amphipathic_helix_protein_Sin3a_[Bombyx_mori]
FPKM:5.30 TPM:4.91
2391 A_BomaMG_comp12541_c0_seq1
1503bp
PREDICTED:_persulfide_dioxygenase_ETHE1,_mitochondrial_[Papilio_polytes]
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006749 P glutathione metabolic process
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0050313 F sulfur dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070813 P hydrogen sulfide metabolic process
FPKM:37.23 TPM:34.47
2392 A_BomaMG_comp12543_c0_seq1
1292bp
PREDICTED:_S-adenosylmethionine_decarboxylase_proenzyme_[Bombyx_mori]
GO:0004014 F adenosylmethionine decarboxylase activity
GO:0005829 C cytosol
GO:0006557 P S-adenosylmethioninamine biosynthetic process
GO:0006596 P polyamine biosynthetic process
GO:0006597 P spermine biosynthetic process
GO:0008295 P spermidine biosynthetic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0050829 P defense response to Gram-negative bacterium
FPKM:42.76 TPM:39.60
2393 A_BomaMG_comp12544_c0_seq1
2384bp
S-adenosyl-L-homocysteine_hydrolase_[Bombyx_mori]
GO:0004013 F adenosylhomocysteinase activity
GO:0005829 C cytosol
GO:0006730 P one-carbon metabolic process
GO:0016787 F hydrolase activity
GO:0033353 P S-adenosylmethionine cycle
FPKM:90.50 TPM:83.80
2394 A_BomaMG_comp125454_c0_seq1
216bp
FPKM:1.55 TPM:1.44
2395 A_BomaMG_comp12545_c0_seq1
2291bp
PREDICTED:_tubulin_beta_chain-like_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0008152 P metabolic process
FPKM:372.57 TPM:344.98
2396 A_BomaMG_comp12546_c0_seq1
448bp
NADH_dehydrogenase_subunit_3_[Bombyx_mandarina]
GO:0005739 C mitochondrion
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0031966 C mitochondrial membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:818.41 TPM:757.82
2397 A_BomaMG_comp12547_c0_seq1
3615bp
PREDICTED:_dolichyl-diphosphooligosaccharide--protein_glycosyltransferase_subunit_STT3A_[Papilio_machaon]
GO:0004576 F oligosaccharyl transferase activity
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0008250 C oligosaccharyltransferase complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0043686 P co-translational protein modification
GO:0043687 P post-translational protein modification
FPKM:38.64 TPM:35.78
2398 A_BomaMG_comp12548_c0_seq1
596bp
60S_ribosomal_protein_L18_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:907.07 TPM:839.91
2399 A_BomaMG_comp12549_c0_seq1
1053bp
serine_protease_3_[Lonomia_obliqua]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
FPKM:296.37 TPM:274.43
2400 A_BomaMG_comp1254_c0_seq1
208bp
FPKM:2.72 TPM:2.52
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