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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2251 A_BomaMG_comp124330_c0_seq1
576bp
PREDICTED:_exocyst_complex_component_4-like_[Amyelois_transitella]
GO:0000145 C exocyst
GO:0000916 P actomyosin contractile ring contraction
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0007009 P plasma membrane organization
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007269 P neurotransmitter secretion
GO:0007286 P spermatid development
GO:0007298 P border follicle cell migration
GO:0009925 C basal plasma membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016028 C rhabdomere
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0016324 C apical plasma membrane
GO:0050803 P regulation of synapse structure or activity
GO:0090522 P vesicle tethering involved in exocytosis
GO:0098793 C presynapse
FPKM:3.52 TPM:3.26
2252 A_BomaMG_comp12433_c0_seq1
510bp
mitochondrial_ATP_synthase_coupling_factor_6_[Bombyx_mori]
GO:0000276 C mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005756 C mitochondrial proton-transporting ATP synthase, central stalk
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046331 P lateral inhibition
FPKM:435.99 TPM:403.71
2253 A_BomaMG_comp124345_c0_seq1
998bp
Uncharacterized_protein_OBRU01_01200_[Operophtera_brumata]
FPKM:2.28 TPM:2.11
2254 A_BomaMG_comp124353_c0_seq1
235bp
PREDICTED:_uncharacterized_protein_LOC106136585_[Amyelois_transitella]
FPKM:10.82 TPM:10.02
2255 A_BomaMG_comp124357_c0_seq1
239bp
PREDICTED:_suppressor_of_fused_homolog_isoform_X2_[Amyelois_transitella]
FPKM:9.14 TPM:8.47
2256 A_BomaMG_comp12435_c0_seq1
1360bp
presenilin_isoform_A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002027 P regulation of heart rate
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005887 C integral component of plasma membrane
GO:0005938 C cell cortex
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006816 P calcium ion transport
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008233 F peptidase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030018 C Z disc
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0046331 P lateral inhibition
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048471 C perinuclear region of cytoplasm
GO:0048812 P neuron projection morphogenesis
GO:0050435 P amyloid-beta metabolic process
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
FPKM:23.54 TPM:21.79
2257 A_BomaMG_comp12436_c0_seq1
4871bp
PREDICTED:_serine/threonine-protein_kinase_par-1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0032870 P cellular response to hormone stimulus
GO:0035556 P intracellular signal transduction
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
FPKM:27.75 TPM:25.70
2258 A_BomaMG_comp12438_c0_seq1
629bp
myosin_vi_[Danaus_plexippus]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006997 P nucleus organization
GO:0007015 P actin filament organization
GO:0007051 P spindle organization
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007552 P metamorphosis
GO:0007560 P imaginal disc morphogenesis
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0008363 P larval chitin-based cuticle development
GO:0016333 P morphogenesis of follicular epithelium
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0019749 P cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte
GO:0030036 P actin cytoskeleton organization
GO:0030048 P actin filament-based movement
GO:0030139 C endocytic vesicle
GO:0030317 P flagellated sperm motility
GO:0030426 C growth cone
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0031476 C myosin VI complex
GO:0031941 C filamentous actin
GO:0032027 F myosin light chain binding
GO:0032880 P regulation of protein localization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0040001 P establishment of mitotic spindle localization
GO:0042623 F ATP hydrolysis activity
GO:0043234 C protein-containing complex
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045172 C germline ring canal
GO:0045175 P basal protein localization
GO:0045178 C basal part of cell
GO:0045217 P cell-cell junction maintenance
GO:0045921 P positive regulation of exocytosis
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0051015 F actin filament binding
GO:0051647 P nucleus localization
GO:0055057 P neuroblast division
GO:0055059 P asymmetric neuroblast division
GO:0061024 P membrane organization
GO:0070856 F myosin VI light chain binding
GO:0070864 C sperm individualization complex
GO:0070865 C investment cone
FPKM:15.44 TPM:14.30
2259 A_BomaMG_comp12438_c1_seq1
289bp
PREDICTED:_LOW_QUALITY_PROTEIN:_myosin_heavy_chain_95F-like_[Plutella_xylostella]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006997 P nucleus organization
GO:0007015 P actin filament organization
GO:0007051 P spindle organization
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007552 P metamorphosis
GO:0007560 P imaginal disc morphogenesis
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0008363 P larval chitin-based cuticle development
GO:0016333 P morphogenesis of follicular epithelium
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0019749 P cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte
GO:0030036 P actin cytoskeleton organization
GO:0030048 P actin filament-based movement
GO:0030139 C endocytic vesicle
GO:0030317 P flagellated sperm motility
GO:0030426 C growth cone
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0031476 C myosin VI complex
GO:0031941 C filamentous actin
GO:0032027 F myosin light chain binding
GO:0032880 P regulation of protein localization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0040001 P establishment of mitotic spindle localization
GO:0042623 F ATP hydrolysis activity
GO:0043234 C protein-containing complex
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045172 C germline ring canal
GO:0045175 P basal protein localization
GO:0045178 C basal part of cell
GO:0045217 P cell-cell junction maintenance
GO:0045921 P positive regulation of exocytosis
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0051015 F actin filament binding
GO:0051647 P nucleus localization
GO:0055057 P neuroblast division
GO:0055059 P asymmetric neuroblast division
GO:0061024 P membrane organization
GO:0070856 F myosin VI light chain binding
GO:0070864 C sperm individualization complex
GO:0070865 C investment cone
FPKM:2.48 TPM:2.30
2260 A_BomaMG_comp12439_c0_seq1
1155bp
ribosomal_P0_protein_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
FPKM:314.12 TPM:290.87
2261 A_BomaMG_comp124402_c0_seq1
410bp
PREDICTED:_cell_division_cycle_2_like-1_isoform_X1_[Bombyx_mori]
FPKM:2.37 TPM:2.20
2262 A_BomaMG_comp124405_c0_seq1
1682bp
PREDICTED:_probable_Rho_GTPase-activating_protein_CG5521_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
FPKM:2.28 TPM:2.11
2263 A_BomaMG_comp12440_c0_seq1
2318bp
PREDICTED:_succinyl-CoA_ligase_[ADP-forming]_subunit_beta,_mitochondrial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004775 F succinate-CoA ligase (ADP-forming) activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:27.88 TPM:25.82
2264 A_BomaMG_comp12441_c0_seq1
507bp
FPKM:31.82 TPM:29.47
2265 A_BomaMG_comp12442_c0_seq1
2149bp
PREDICTED:_malate_dehydrogenase,_mitochondrial_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005886 C plasma membrane
GO:0005975 P carbohydrate metabolic process
GO:0006094 P gluconeogenesis
GO:0006099 P tricarboxylic acid cycle
GO:0006107 P oxaloacetate metabolic process
GO:0006108 P malate metabolic process
GO:0006475 P internal protein amino acid acetylation
GO:0006734 P NADH metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016615 F malate dehydrogenase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019752 P carboxylic acid metabolic process
GO:0030060 F L-malate dehydrogenase activity
GO:0043209 C myelin sheath
GO:0043621 F protein self-association
GO:0044822 F RNA binding
GO:0046554 F malate dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
FPKM:440.31 TPM:407.71
2266 A_BomaMG_comp124430_c0_seq1
441bp
FPKM:2.22 TPM:2.06
2267 A_BomaMG_comp124439_c0_seq1
362bp
FPKM:3.75 TPM:3.47
2268 A_BomaMG_comp12443_c0_seq1
596bp
FPKM:28.18 TPM:26.09
2269 A_BomaMG_comp124447_c0_seq1
736bp
FPKM:2.26 TPM:2.09
2270 A_BomaMG_comp12444_c0_seq1
2467bp
PREDICTED:_GPI_mannosyltransferase_1_[Amyelois_transitella]
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
FPKM:28.72 TPM:26.60
2271 A_BomaMG_comp124467_c0_seq1
665bp
FPKM:2.59 TPM:2.40
2272 A_BomaMG_comp124468_c0_seq1
659bp
PREDICTED:_cohesin_subunit_SA-2_isoform_X1_[Papilio_machaon]
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
FPKM:2.84 TPM:2.63
2273 A_BomaMG_comp12446_c0_seq1
1584bp
roadblock_domain-containing_protein_3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005794 C Golgi apparatus
GO:0016049 P cell growth
GO:0032008 P positive regulation of TOR signaling
GO:0032947 F molecular adaptor activity
GO:0034613 P cellular protein localization
GO:0043547 P positive regulation of GTPase activity
GO:0071230 P cellular response to amino acid stimulus
GO:0071986 C Ragulator complex
FPKM:15.10 TPM:13.98
2274 A_BomaMG_comp124473_c0_seq1
371bp
PREDICTED:_N-alpha-acetyltransferase_15,_NatA_auxiliary_subunit-like,_partial_[Amyelois_transitella]
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006474 P N-terminal protein amino acid acetylation
GO:0016407 F acetyltransferase activity
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0031415 C NatA complex
GO:0043022 F ribosome binding
GO:0043066 P negative regulation of apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0050821 P protein stabilization
GO:0070062 C extracellular exosome
FPKM:4.11 TPM:3.81
2275 A_BomaMG_comp12447_c0_seq1
1513bp
H+_transporting_ATP_synthase_gamma_subunit_[Bombyx_mori]
GO:0000275 C mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005811 C lipid droplet
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006909 P phagocytosis
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:511.81 TPM:473.92
2276 A_BomaMG_comp12448_c0_seq1
2309bp
PREDICTED:_monocarboxylate_transporter_5_[Amyelois_transitella]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:134.53 TPM:124.57
2277 A_BomaMG_comp1244_c0_seq1
223bp
PREDICTED:_protein_crumbs_[Bombyx_mori]
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0008104 P protein localization
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016028 C rhabdomere
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 P regulation of protein localization
GO:0033157 P regulation of intracellular protein transport
GO:0034332 P adherens junction organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035090 P maintenance of apical/basal cell polarity
GO:0035239 P tube morphogenesis
GO:0035330 P regulation of hippo signaling
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042327 P positive regulation of phosphorylation
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045218 P zonula adherens maintenance
GO:0045494 P photoreceptor cell maintenance
GO:0045570 P regulation of imaginal disc growth
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046621 P negative regulation of organ growth
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0048477 P oogenesis
GO:0050821 P protein stabilization
GO:0051642 P centrosome localization
GO:0061024 P membrane organization
GO:0061336 P cell morphogenesis involved in Malpighian tubule morphogenesis
GO:0061541 P rhabdomere morphogenesis
GO:0098813 P nuclear chromosome segregation
FPKM:1.37 TPM:1.27
2278 A_BomaMG_comp124501_c0_seq1
792bp
PREDICTED:_HEAT_repeat-containing_protein_5B_[Bombyx_mori]
FPKM:2.77 TPM:2.57
2279 A_BomaMG_comp124515_c0_seq1
2197bp
PREDICTED:_uncharacterized_protein_LOC101744707_[Bombyx_mori]
FPKM:2.70 TPM:2.50
2280 A_BomaMG_comp124519_c0_seq1
265bp
MULTISPECIES:_UDP-galactopyranose_mutase_[Enterobacteriaceae]
FPKM:2.35 TPM:2.17
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