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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2221 A_BomaMG_comp124111_c0_seq1
764bp
PREDICTED:_FGFR1_oncogene_partner_2_homolog_[Papilio_machaon]
GO:0005737 C cytoplasm
GO:0042060 P wound healing
GO:0042803 F protein homodimerization activity
FPKM:4.01 TPM:3.71
2222 A_BomaMG_comp12411_c0_seq1
535bp
PREDICTED:_uncharacterized_protein_LOC106103030_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
FPKM:654.37 TPM:605.92
2223 A_BomaMG_comp12412_c0_seq1
3670bp
PREDICTED:_sodium/potassium/calcium_exchanger_3-like_[Papilio_xuthus]
GO:0005262 F calcium channel activity
GO:0005509 F calcium ion binding
GO:0005802 C trans-Golgi network
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008273 F calcium, potassium:sodium antiporter activity
GO:0012505 C endomembrane system
GO:0015293 F symporter activity
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030955 F potassium ion binding
GO:0031402 F sodium ion binding
GO:0035725 P sodium ion transmembrane transport
GO:0048021 P regulation of melanin biosynthetic process
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
FPKM:154.50 TPM:143.06
2224 A_BomaMG_comp12413_c0_seq1
203bp
PREDICTED:_solute_carrier_family_25_member_36-like_[Octopus_bimaculoides]
FPKM:159.55 TPM:147.73
2225 A_BomaMG_comp124149_c0_seq1
804bp
FPKM:2.61 TPM:2.42
2226 A_BomaMG_comp12414_c0_seq1
1467bp
Collagenase_[Papilio_xuthus]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
FPKM:1205.77 TPM:1116.50
2227 A_BomaMG_comp12415_c1_seq1
720bp
juvenile_hormone_diol_kinase_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0046872 F metal ion binding
FPKM:868.15 TPM:803.87
2228 A_BomaMG_comp12416_c0_seq1
1390bp
PREDICTED:_uncharacterized_protein_LOC105389192_[Plutella_xylostella]
FPKM:185.69 TPM:171.94
2229 A_BomaMG_comp1241_c0_seq1
510bp
PREDICTED:_GDNF-inducible_zinc_finger_protein_1_isoform_X6_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.14 TPM:1.05
2230 A_BomaMG_comp12422_c0_seq1
279bp
FPKM:10.19 TPM:9.44
2231 A_BomaMG_comp12422_c0_seq2
237bp
FPKM:1.66 TPM:1.54
2232 A_BomaMG_comp124253_c0_seq1
727bp
PREDICTED:_LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_14_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:2.55 TPM:2.36
2233 A_BomaMG_comp12425_c0_seq1
1905bp
chaperonin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
FPKM:26.47 TPM:24.51
2234 A_BomaMG_comp124261_c0_seq1
887bp
E2F_transcription_factor_4-like_protein_[Bombyx_mori]
GO:0000278 P mitotic cell cycle
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030030 P cell projection organization
GO:0044458 P motile cilium assembly
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0098534 P centriole assembly
GO:1903251 P multi-ciliated epithelial cell differentiation
FPKM:2.54 TPM:2.35
2235 A_BomaMG_comp124266_c0_seq1
517bp
FPKM:3.03 TPM:2.81
2236 A_BomaMG_comp124268_c0_seq1
511bp
FPKM:2.57 TPM:2.38
2237 A_BomaMG_comp12426_c0_seq1
2076bp
putative_amino_acid_transporter_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005283 F amino acid:sodium symporter activity
GO:0005328 F neurotransmitter:sodium symporter activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006836 P neurotransmitter transport
GO:0006865 P amino acid transport
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015804 P neutral amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042940 P D-amino acid transport
GO:0042943 F D-amino acid transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:1903825 P organic acid transmembrane transport
FPKM:349.86 TPM:323.95
2238 A_BomaMG_comp12427_c0_seq1
1051bp
hypothetical_protein_D910_05446_[Dendroctonus_ponderosae]
FPKM:48.53 TPM:44.94
2239 A_BomaMG_comp12427_c0_seq2
3519bp
succinate_dehydrogenase_[Danaus_plexippus]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005749 C mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
GO:0005875 C microtubule associated complex
GO:0006099 P tricarboxylic acid cycle
GO:0006121 P mitochondrial electron transport, succinate to ubiquinone
GO:0008177 F succinate dehydrogenase (ubiquinone) activity
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0048039 F ubiquinone binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0051538 F 3 iron, 4 sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:46.30 TPM:42.87
2240 A_BomaMG_comp124283_c0_seq1
622bp
PREDICTED:_uncharacterized_protein_LOC106130501_[Amyelois_transitella]
FPKM:2.92 TPM:2.71
2241 A_BomaMG_comp124286_c0_seq1
349bp
FPKM:2.02 TPM:1.87
2242 A_BomaMG_comp12429_c0_seq1
1706bp
eukaryotic_translation_initiation_factor_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0044822 F RNA binding
FPKM:24.42 TPM:22.61
2243 A_BomaMG_comp124300_c0_seq1
1738bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_43_isoform_X2_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019785 F ISG15-specific protease activity
GO:0019985 P translesion synthesis
GO:0036459 F thiol-dependent deubiquitinase
FPKM:2.59 TPM:2.39
2244 A_BomaMG_comp124303_c0_seq1
816bp
transcription_factor_2B_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0018095 P protein polyglutamylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0060271 P cilium assembly
GO:0060296 P regulation of cilium beat frequency involved in ciliary motility
GO:0070062 C extracellular exosome
GO:2000147 P positive regulation of cell motility
GO:2000253 P positive regulation of feeding behavior
FPKM:2.29 TPM:2.12
2245 A_BomaMG_comp124305_c0_seq1
373bp
FPKM:2.30 TPM:2.13
2246 A_BomaMG_comp124307_c0_seq1
280bp
PREDICTED:_protein_sel-1_homolog_1_isoform_X2_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:7.07 TPM:6.54
2247 A_BomaMG_comp124311_c0_seq1
246bp
FPKM:3.43 TPM:3.17
2248 A_BomaMG_comp124313_c0_seq1
1375bp
RSM22-like_protein,_mitochondrial_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005507 F copper ion binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030529 C ribonucleoprotein complex
GO:0032259 P methylation
FPKM:2.55 TPM:2.36
2249 A_BomaMG_comp12431_c0_seq1
507bp
Myeloma-overexpressed_gene_2_protein-like_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:29.40 TPM:27.23
2250 A_BomaMG_comp12432_c0_seq1
1735bp
deoxyhypusine_hydroxylase/monooxygenase_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007423 P sensory organ development
GO:0007451 P dorsal/ventral lineage restriction, imaginal disc
GO:0008283 P cell population proliferation
GO:0008612 P peptidyl-lysine modification to peptidyl-hypusine
GO:0010508 P positive regulation of autophagy
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016491 F oxidoreductase activity
GO:0019135 F deoxyhypusine monooxygenase activity
GO:0042406 C extrinsic component of endoplasmic reticulum membrane
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:28.60 TPM:26.48
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