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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2191 A_BomaMG_comp12384_c0_seq1
491bp
NADH_dehydrogenase_[ubiquinone]_iron-sulfur_protein_5-like_[Papilio_xuthus]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0005758 C mitochondrial intermembrane space
GO:0016020 C membrane
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:148.54 TPM:137.54
2192 A_BomaMG_comp12384_c1_seq1
201bp
FPKM:1.06 TPM:0.98
2193 A_BomaMG_comp12385_c0_seq1
951bp
NADH-ubiquinone_oxidoreductase_Fe-S_protein_7_[Bombyx_mori]
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016491 F oxidoreductase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0046872 F metal ion binding
GO:0048038 F quinone binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:114.62 TPM:106.14
2194 A_BomaMG_comp12386_c0_seq1
786bp
ribosomal_protein_S5_[Bombyx_mori]
GO:0000028 P ribosomal small subunit assembly
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0005925 C focal adhesion
GO:0006364 P rRNA processing
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006450 P regulation of translational fidelity
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0015935 C small ribosomal subunit
GO:0016020 C membrane
GO:0019083 P viral transcription
GO:0019843 F rRNA binding
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
FPKM:744.98 TPM:689.83
2195 A_BomaMG_comp12387_c0_seq1
926bp
PREDICTED:_elongation_factor_1_delta_isoform_X1_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0005875 C microtubule associated complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0043547 P positive regulation of GTPase activity
FPKM:155.27 TPM:143.77
2196 A_BomaMG_comp12387_c0_seq2
839bp
PREDICTED:_elongation_factor_1_delta_isoform_X2_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:178.41 TPM:165.20
2197 A_BomaMG_comp12388_c0_seq1
500bp
PREDICTED:_uncharacterized_protein_LOC106130313_[Amyelois_transitella]
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:153.19 TPM:141.84
2198 A_BomaMG_comp123893_c0_seq1
232bp
FPKM:1.19 TPM:1.10
2199 A_BomaMG_comp12389_c0_seq1
292bp
hypothetical_protein_RR48_07455_[Papilio_machaon]
FPKM:88.23 TPM:81.70
2200 A_BomaMG_comp12389_c1_seq1
566bp
FPKM:118.46 TPM:109.69
2201 A_BomaMG_comp12390_c0_seq1
4196bp
UDP-N-acetylhexosamine_pyrophosphorylase-like_protein_1_[Bombyx_mori]
GO:0003977 F UDP-N-acetylglucosamine diphosphorylase activity
GO:0005829 C cytosol
GO:0006048 P UDP-N-acetylglucosamine biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070569 F uridylyltransferase activity
FPKM:783.38 TPM:725.38
2202 A_BomaMG_comp12391_c0_seq1
577bp
ribosomal_protein_L22_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:753.57 TPM:697.78
2203 A_BomaMG_comp12393_c0_seq1
1857bp
alpha-esterase_3_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:119.21 TPM:110.38
2204 A_BomaMG_comp12393_c1_seq1
426bp
alpha-esterase_3_precursor_[Bombyx_mori]
FPKM:112.63 TPM:104.29
2205 A_BomaMG_comp12394_c0_seq1
2412bp
NIPSNAP_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:120.89 TPM:111.94
2206 A_BomaMG_comp12396_c0_seq1
2500bp
ornithine_decarboxylase_antizyme_[Bombyx_mori]
GO:0004857 F enzyme inhibitor activity
GO:0008073 F ornithine decarboxylase inhibitor activity
GO:0043086 P negative regulation of catalytic activity
FPKM:158.67 TPM:146.92
2207 A_BomaMG_comp12397_c0_seq1
1006bp
35kDa_protease_precursor_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
FPKM:1008.77 TPM:934.08
2208 A_BomaMG_comp12398_c0_seq1
1487bp
PREDICTED:_actin,_cytoplasmic_A3a_isoform_X1_[Bactrocera_dorsalis]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
FPKM:2178.19 TPM:2016.93
2209 A_BomaMG_comp12399_c0_seq1
866bp
farnesoic_acid_O-methyltransferase_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
FPKM:226.02 TPM:209.28
2210 A_BomaMG_comp12399_c0_seq2
1121bp
putative_farnesoic_acid_O-methyl_transferase_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
FPKM:256.95 TPM:237.93
2211 A_BomaMG_comp123_c0_seq1
256bp
FPKM:0.87 TPM:0.80
2212 A_BomaMG_comp12400_c0_seq1
395bp
FPKM:0.50 TPM:0.46
2213 A_BomaMG_comp12400_c0_seq2
479bp
FPKM:347.01 TPM:321.31
2214 A_BomaMG_comp12401_c0_seq1
2064bp
PREDICTED:_lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:216.35 TPM:200.33
2215 A_BomaMG_comp12403_c0_seq1
3180bp
PREDICTED:_elongation_factor_1-alpha_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:1099.89 TPM:1018.46
2216 A_BomaMG_comp12404_c0_seq1
226bp
FPKM:35.97 TPM:33.31
2217 A_BomaMG_comp12406_c0_seq1
697bp
cytochrome_b-c1_complex_subunit_10_[Bombyx_mori]
FPKM:154.98 TPM:143.51
2218 A_BomaMG_comp12407_c0_seq1
651bp
PREDICTED:_phosphatidylethanolamine-binding_protein_homolog_F40A3.3-like_[Plutella_xylostella]
GO:0005739 C mitochondrion
GO:0008289 F lipid binding
FPKM:238.92 TPM:221.23
2219 A_BomaMG_comp12409_c0_seq1
665bp
ribosomal_protein_S23_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:1087.62 TPM:1007.10
2220 A_BomaMG_comp12410_c0_seq1
1016bp
myosin_regulatory_light_chain_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005509 F calcium ion binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016459 C myosin complex
GO:0046872 F metal ion binding
FPKM:194.77 TPM:180.35
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