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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2131 A_BomaMG_comp12322_c0_seq1
213bp
FPKM:50.99 TPM:47.21
2132 A_BomaMG_comp12323_c0_seq1
2590bp
PREDICTED:_plastin-2_[Papilio_machaon]
GO:0001725 C stress fiber
GO:0001726 C ruffle
GO:0001891 C phagocytic cup
GO:0002102 C podosome
GO:0002286 P T cell activation involved in immune response
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0009611 P response to wounding
GO:0010737 P protein kinase A signaling
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0022617 P extracellular matrix disassembly
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0031100 P animal organ regeneration
GO:0032432 C actin filament bundle
GO:0032587 C ruffle membrane
GO:0033157 P regulation of intracellular protein transport
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0051020 F GTPase binding
GO:0070062 C extracellular exosome
GO:0071803 P positive regulation of podosome assembly
FPKM:60.44 TPM:55.97
2133 A_BomaMG_comp12324_c0_seq1
725bp
PREDICTED:_HIG1_domain_family_member_2A,_mitochondrial_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0043066 P negative regulation of apoptotic process
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:49.79 TPM:46.11
2134 A_BomaMG_comp12324_c0_seq2
1523bp
HIG1_domain_family_member_2A,_mitochondrial_[Papilio_xuthus]
FPKM:3.43 TPM:3.17
2135 A_BomaMG_comp12327_c0_seq1
3769bp
transferin_[Helicoverpa_armigera]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0046872 F metal ion binding
GO:0055072 P iron ion homeostasis
FPKM:371.64 TPM:344.13
2136 A_BomaMG_comp12328_c0_seq1
1972bp
vacuolar_ATP_synthase_21_kDa_proteolipid_subunit_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005768 C endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007035 P vacuolar acidification
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033177 C proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:304.70 TPM:282.14
2137 A_BomaMG_comp12328_c0_seq2
1013bp
vacuolar_ATP_synthase_21_kDa_proteolipid_subunit_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005768 C endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007035 P vacuolar acidification
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033177 C proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:142.77 TPM:132.20
2138 A_BomaMG_comp12329_c0_seq1
588bp
ribosomal_protein_S15_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:630.20 TPM:583.54
2139 A_BomaMG_comp12330_c0_seq1
759bp
elongation_factor_1-beta'_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
FPKM:400.57 TPM:370.91
2140 A_BomaMG_comp12331_c0_seq1
937bp
cytochrome_c_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0009055 F electron transfer activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:355.06 TPM:328.77
2141 A_BomaMG_comp12332_c0_seq1
419bp
40S_ribosomal_protein_S28_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:810.02 TPM:750.05
2142 A_BomaMG_comp12333_c0_seq1
800bp
ribosomal_protein_L10A_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:640.29 TPM:592.88
2143 A_BomaMG_comp12334_c0_seq1
1376bp
ribosomal_protein_L3_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000027 P ribosomal large subunit assembly
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007052 P mitotic spindle organization
GO:0019233 P sensory perception of pain
GO:0022625 C cytosolic large ribosomal subunit
GO:0022626 C cytosolic ribosome
GO:0030529 C ribonucleoprotein complex
GO:0051297 P centrosome cycle
GO:0051298 P centrosome duplication
FPKM:671.64 TPM:621.92
2144 A_BomaMG_comp12336_c0_seq1
2303bp
Variable_lymphocyte_receptor_C,_partial_[Operophtera_brumata]
GO:0007409 P axonogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051965 P positive regulation of synapse assembly
FPKM:391.34 TPM:362.36
2145 A_BomaMG_comp12337_c0_seq1
928bp
ATP_synthase_[Bombyx_mori]
GO:0000276 C mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005811 C lipid droplet
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006909 P phagocytosis
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
FPKM:511.26 TPM:473.41
2146 A_BomaMG_comp12338_c0_seq1
1129bp
NADH_dehydrogenase_subunit_2_[Bombyx_mandarina]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:181.30 TPM:167.88
2147 A_BomaMG_comp12339_c0_seq1
3647bp
PREDICTED:_eukaryotic_translation_initiation_factor_4A_isoform_X1_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000166 F nucleotide binding
GO:0000339 F RNA cap binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003729 F mRNA binding
GO:0003743 F translation initiation factor activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007279 P pole cell formation
GO:0007446 P imaginal disc growth
GO:0009950 P dorsal/ventral axis specification
GO:0010501 P RNA secondary structure unwinding
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016787 F hydrolase activity
GO:0017116 F single-stranded DNA helicase activity
GO:0030718 P germ-line stem cell population maintenance
GO:0043186 C P granule
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0072686 C mitotic spindle
FPKM:87.50 TPM:81.02
2148 A_BomaMG_comp12339_c0_seq2
4096bp
PREDICTED:_eukaryotic_translation_initiation_factor_4A_isoform_X1_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000166 F nucleotide binding
GO:0000339 F RNA cap binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003729 F mRNA binding
GO:0003743 F translation initiation factor activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007279 P pole cell formation
GO:0007446 P imaginal disc growth
GO:0009950 P dorsal/ventral axis specification
GO:0010501 P RNA secondary structure unwinding
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016787 F hydrolase activity
GO:0017116 F single-stranded DNA helicase activity
GO:0030718 P germ-line stem cell population maintenance
GO:0043186 C P granule
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048477 P oogenesis
GO:0051297 P centrosome cycle
GO:0072686 C mitotic spindle
FPKM:44.84 TPM:41.52
2149 A_BomaMG_comp1233_c0_seq1
382bp
uncharacterized_protein_BN606_00635_[Butyrivibrio_sp._CAG:318]
FPKM:1.35 TPM:1.25
2150 A_BomaMG_comp12340_c0_seq1
550bp
putative_NADH_dehydrogenase_[Danaus_plexippus]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022900 P electron transport chain
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:278.74 TPM:258.11
2151 A_BomaMG_comp12343_c0_seq1
1582bp
aquaporin_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:272.02 TPM:251.88
2152 A_BomaMG_comp12345_c0_seq1
1257bp
chymotrypsin-like_serine_protease_precursor_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
FPKM:4453.03 TPM:4123.35
2153 A_BomaMG_comp12346_c0_seq1
1039bp
triacylglycerol_lipase_precursor_[Bombyx_mori]
GO:0004620 F phospholipase activity
GO:0004806 F triglyceride lipase activity
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006629 P lipid metabolic process
GO:0009395 P phospholipid catabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019376 P galactolipid catabolic process
GO:0046872 F metal ion binding
GO:0047372 F acylglycerol lipase activity
GO:0047714 F galactolipase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:2431.90 TPM:2251.85
2154 A_BomaMG_comp12347_c0_seq1
1727bp
glucosidase_precursor_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019137 F thioglucosidase activity
GO:0046872 F metal ion binding
FPKM:2301.34 TPM:2130.96
2155 A_BomaMG_comp12347_c1_seq1
265bp
FPKM:82.76 TPM:76.63
2156 A_BomaMG_comp12347_c2_seq1
854bp
chorion_class_A_[Bombyx_mori]
FPKM:124.12 TPM:114.93
2157 A_BomaMG_comp123480_c0_seq1
534bp
FPKM:2.21 TPM:2.05
2158 A_BomaMG_comp12348_c0_seq1
758bp
peritrophin_type-A_domain_protein_4_[Mamestra_configurata]
FPKM:2277.34 TPM:2108.74
2159 A_BomaMG_comp12349_c0_seq1
2706bp
hypothetical_protein_OXYTRI_13058_[Oxytricha_trifallax]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031396 P regulation of protein ubiquitination
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032496 P response to lipopolysaccharide
GO:0032691 P negative regulation of interleukin-1 beta production
GO:0032695 P negative regulation of interleukin-12 production
GO:0032715 P negative regulation of interleukin-6 production
GO:0032720 P negative regulation of tumor necrosis factor production
GO:0042110 P T cell activation
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
FPKM:13056.68 TPM:12090.02
2160 A_BomaMG_comp1234_c0_seq1
315bp
PREDICTED:_protein_Jumonji_isoform_X2_[Bombyx_mori]
GO:0000792 C heterochromatin
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0046872 F metal ion binding
GO:0048439 P flower morphogenesis
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.76 TPM:1.63
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