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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12349_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_OXYTRI_13058_[Oxytricha_trifallax]
Ontology
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031396 P regulation of protein ubiquitination
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032496 P response to lipopolysaccharide
GO:0032691 P negative regulation of interleukin-1 beta production
GO:0032695 P negative regulation of interleukin-12 production
GO:0032715 P negative regulation of interleukin-6 production
GO:0032720 P negative regulation of tumor necrosis factor production
GO:0042110 P T cell activation
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
Transcript
Level		FPKM:13056.68 TPM:12090.02
ORF Entry
Sequence
(Nucleotide)
ATAATAATAATAATAATAATATAATATATTTATTATAGATTAACCGAAACGCTGCGGTCG
CCGTAACACCGTGAGACATATGCGTAACTCATGCGACGGCATGTTCGTTCGGTTAGTTCA
TTTCTAATTTCAGAATGAAACAATCAAACGGACGAATGCACCTGTTCGTTCAGTCGTTTA
CGTCATTCTGTACGTTCCGTGCGCGATTTTGAAATTTTATTCGTTAAAACGAATTATAAT
ATTTCATATGGTGTTTTTATTTAAACATTATATGTTTTAACGTGAACGGTTTATGCGAAA
TCTCGGTGGACCGATTTTGTATAATTATCCTTTTCCTTAAAAATTAAATTTTCTAGGATA
TGGATTTTTATATATTTAATGATATTATTTATTAGTAAACAACGAGAGTTGTTTATTATA
TAAATACTATTATAATACCTAAACACGATCACGCCGTACGAGCGTTTTTACGCCCGATGC
GGTGCGACGTTTTAGTTTTCGAGCTAACGAAAAAGAGAGCTCCCTGGTTGATCCTGCCAG
TAGTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTCAGTGCAAGCCGTATTAAGG
CGATACCGCGAATGGCTCAATATATCAGTTTTGGTTCCTTAGATCTTACTCAGTTACTTG
GATAACTGTGGTAATTCTAGAGCTAATACATGCAATCAGAACTCTGACCAGTGATGGGAT
GAGTGCTTTTATTAGATCAAAACCAATCGACGGAGGGCCTCGCGTCCGAAGTCGTTAATT
TTGATGAATCTGGATAACTTTTGCAGATCGCATGGTCAAGTACCGGCGACGCATCTTTCA
AATGTCTGCCTTATCAACTTTCGATGGTAGTTTCTGCGACTACCATGGTTGTCACGGGTA
ACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGG
AAGGCAGCAGGCGCGCAAATTACCCACTCCCGGCACGGGGAGGTAGTGACGAAAAATAAC
GATACGGGACTCTTACGAGGCCTCGTAATCGGAATGAGTACACTTTAAATATTTTAACGA
GGAACAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGT
ATACTAAAATTGTTGCGGTTAAAAAGCTCGTAGTTGCATTTGTGCGCCGCGCTGTCGGTG
CACCGCATCCGCGGTGATACTGACACGTTTGCGGAGCATATCGTCGGTGAGCCGGCGTTC
TAAAAAACGCCGGTTCAATATCAAAATCCTATCGCGGTGCTCTTCGGTGAGTGTCGAGGT
GGGCCGACAATTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTAAAAATGCTGCTT
GAATATTTCGTGCATGGAATAATAGAATATGATCTCGGTTCTATTTTGTTGGTTTTCAGA
ACTCCGAGGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTG
AAATTCTTGGATCGTCGCAAGACGAACATCAGCGAAAGCATTTGCCAAAGGTGTTTTCAT
CAATCAAGAACGAAAGTTAGAGGTTCGAAGGCGATTAGATACCGCCCTAGTTCTAACCGT
AAATATGTCATCTAGCGATCCGCCGACGTTACTACAATGGCTCGGCGGGCAGCTTCCGGG
AAACCAAAGATTTTGGACTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATT
GACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAATC
TCACCAGGCCCGGACACCGGAAGGATTGACAGATTAACAGCTCTTTCTTGATTCGGTGGG
TGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGGTAACGA
ACGAGACTCTAGCCTGCTAAATAGGCGTCGTTATTTAGGTGTGCGCGGCCTCGTGTCGCG
CAACTCACTGACGACGTATTAAAATTCTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACG
AGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACA
CTGAAGGAATCAGCATGTTCTCCCTGGCCTAGAGGCCCGGGCAACCCGCTGAAACTCCTT
CGTGCTGGGGATTGGGGTTTGCAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCG
AGTCATAAGCTCGCGTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTACTAC
CGATTGAATGATTTAGTGAGGTCTTCGGACCGACACGCGGTGGCTTCACGGCCGTCGGCG
TTGTTGGGAAGTTGACCAAACTTGATCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTC
CGTAGGGGAACCTGCGGAAGGATCATTAACGTGTGTTGTGTATTGTGTGTGATATGTAAA
TATTTTATTTATTTATTTATATATATATACGCATGCATACATTCGATCGTTCTTAATTTT
TATCGTTTATCCGATTTCTCACGCTCTCGCGCGCGTTTGTCGCGACGATATTGAATCTGA
CTGCTGACATTATATATCTAATACTGCTGCGTACTGCACGCGCACGGCAGCACACGCATA
AAACTATACGCGCACTACAAAATACCATTACTGACACCGAAATTACAGTGTTGTTCTGTG
TTTGTG
(2706 bp)

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