SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12323_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_plastin-2_[Papilio_machaon]
Ontology
GO:0001725 C stress fiber
GO:0001726 C ruffle
GO:0001891 C phagocytic cup
GO:0002102 C podosome
GO:0002286 P T cell activation involved in immune response
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0009611 P response to wounding
GO:0010737 P protein kinase A signaling
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0022617 P extracellular matrix disassembly
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0031100 P animal organ regeneration
GO:0032432 C actin filament bundle
GO:0032587 C ruffle membrane
GO:0033157 P regulation of intracellular protein transport
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0051020 F GTPase binding
GO:0070062 C extracellular exosome
GO:0071803 P positive regulation of podosome assembly
Transcript
Level		FPKM:60.44 TPM:55.97
ORF Entry
Sequence
(Nucleotide)
GCAATTTGTCGTACGTAGCTAAGGTCGACTAAGTTATTTCATATTTGACGAACACGTAGA
AGGGACGGTCCAATAAGACTTGTCTTGAAGGCGGAAAATTACTAAATGAAATCTAAATTA
AAGTGCTACTAATTTCTACGTTTATATTTTATGTGTAAGTGAACAGTGAAAGAAGCGATA
GTGAGATAGAGACTAGCAAAAGCGGCGTATGTGCATGTGATTTGTTTTTGTGAATTTTGC
AAAACTGACAATGGCAGACAATTCAAAATTGACCGACGAAGAATTAATAGAGATCCGGGA
GCAATTCGCGCAGCTGGACACTAGCGGCAATGGCTACATCGACTTGAAAGAACTGAAGGA
TGCTCTAGACGGTGTAGGATATAAGATTCCACAATGGAAGGTACGGTGCATGATCGAGGA
GTACTACGATAATGGAGGGAAGCACGGACGAGGTGTCAACGGAAGTTTGAACGGCGACGC
CAGACGGAACGGCATGTCGCTTGTGGAGTTTGAGGATCTGTGCGCCAATCTTAAAGCACA
ACAGGTGTCGAGTACCTTCAAGCAGGCGGTCAGTAAAAAAGAGAATTTGGAACACCTGGG
AGGCATGAGCGAAGCATCAAGCGATGGTACAACGCACTCTGTGCGACTCGAAGAACAGAT
GGCGTTTTCTGGTTGGATCAACAGTAACTTGGAACACGATCCAGACCTCAAACATCTCTT
GCCGATCGATCCCGAAGGCAAGCAGCTCTACGAGAAACTCAAAGACGGACTTATTCTATG
CAAAGTAATAAATCACTCGTGCCCGGACACGATAGACGAGCGAGCGATCAACAAGAAGAA
CCTGACGTTATACACGAAACACGAGAACTTGACTCTGGCGCTGGTCTCCTCGCAGGCCAT
CGGGTGTAACATCGTCAACATTGACGCTCACGATCTTGCTAAAGGCAAACCTCATCTGGT
GCTCGGTCTCCTGTGGCAGATCATCCGAATTGGTCTCTTCAACCAGATAACGCTGGAGCA
CTGCCCTGGACTCACGGAATTGCTGAATGACCAGGAACGCATCGAGGATCTGTTGGCTCT
GTCCCCGGAGGCTATCCTGCTGCGCTGGGTCAACCACCAGCTGCAGTCCGCCGGCGTCAC
GCGGCGCTGCGCCAACTTCCAGCACGACGTGGCCGACTCCGAGATCTACTCCTACCTGCT
GAAGCAGATCGCGCCCTCCGATGCCGGCGTCACGCTCGAGGCTCTCTCGGAGTCCGATCT
GCACCGTCGCGCCGAGATAATGTTGCAACAAGCGGAGAAGCTGCGGTGCCGCGCGTTCGT
GACGCCCGCCGACGTGGTGGCCGGCGTCTACAAACTCAACCTGGCGTTCGTGGCCAACCT
CTTCAACCAGCACCCCGGCCTCCAGCGCACCGACGACGCAGAGGAGTACCACCAGCTCGA
CGAGACTAGGGAAGAGAAAACATACCGTAACTGGATGAACTCGATGGGCGTGGCGCCGCA
CGTGAACTGGCTGTACTCCGACCTCACCGACGGACTCGTCATCTTCCAGCTGTACGACAT
CATCAAGCCGGGCATCGTCAATTGGAAGAAGGTTCACCGTCAGTTCTCGAAGCTGCGCAA
GTTCATGGAGCGCCTGGAGAACTGCAACTACGCGGTGGAGCTCGGCCGCGCGCTCGGCTT
CTCGCTCGTCGGCATCGCGGGCGCAGACATCAACGAGGGGAACGCCACGCTCACGCTGGC
TCTGATCTGGCAACTGATGCGAGCGTACACATTGTCGGTACTGACCCGGCTGGCCAACAC
TGGCAACCCTATTATAGAGAAGGAAATCGTTCAGTGGGTCAACAATAAGCTGCAGAGCGC
GGGCAAGCAATCCTCCATTAGGAGCTTCCAGGATGAAGTACTGGCCGATGGGAAGGTCGT
TATTGACTTGATCGATGCCATCAAACCGGGCTCCATCAACTACGACCTGGTGCTGCCCGG
AGGCAACGAGGAGGAGAACTTGGCGAACGCTAAGTACGCGATATCGATGGCTCGTCGCTG
CGGCGGGCGCGTGTACGCGCTGCCCGAGGACATCACCGAACGGAAGCCCAAGATGATTAT
GACGGTTTTCGCCTGCCTCATGGCGCTGGACTACATACCCACCATGGACGCGCCCGTCAA
GCCATCCAGTGATGATGCTGTAATTACCGAAACAGTAGAGACTACAGAGATGTACCAACT
GGTGGAGGATTCGGGCTGGGGTATGCCGACTGTTGAGAAACCGGAGCCGCCTCCAAAACC
TGACAATTTATCGCCACTGCCGAGATCTAATTCTGAGGAGTCTATTAATTAGACATAACG
GCGACTAGGTTATTAAGGTGGCTGCAAATGAAAGGTCAAACATTCCGTATTTCATTTCTT
TTATTTATGTTTAGAAAGGTCTGCAGACTGCTGTTTTTAATGACTAACGGGCTGAAAATA
TTTCGTTTTTAGGTGCAGTATTCATTTCATATTTTTTTTATTTTATTTTTGTAAAATTTT
ATAATGATATACATATTTAAGATCCAATTTTTTATTTATTAAATAATAAATATTAATAAT
TTAAAAAAAA
(2590 bp)

- SilkBase 1999-2023 -