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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1771 A_BomaMG_comp119440_c0_seq1
952bp
FPKM:2.20 TPM:2.03
1772 A_BomaMG_comp119449_c0_seq1
1629bp
PREDICTED:_RNA-binding_protein_28_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
FPKM:2.37 TPM:2.20
1773 A_BomaMG_comp11944_c0_seq1
1395bp
facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:3.15 TPM:2.92
1774 A_BomaMG_comp11944_c1_seq1
1101bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X1_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.65 TPM:2.45
1775 A_BomaMG_comp11945_c0_seq1
360bp
FPKM:2.84 TPM:2.63
1776 A_BomaMG_comp119468_c0_seq1
809bp
PREDICTED:_uncharacterized_protein_LOC105392398_[Plutella_xylostella]
FPKM:3.08 TPM:2.85
1777 A_BomaMG_comp11947_c0_seq1
1593bp
PREDICTED:_DNA-directed_RNA_polymerase_I_subunit_RPA2_[Papilio_polytes]
GO:0001054 F RNA polymerase I activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0016049 P cell growth
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0022008 P neurogenesis
GO:0032549 F ribonucleoside binding
GO:0045793 P positive regulation of cell size
GO:0046872 F metal ion binding
FPKM:2.09 TPM:1.93
1778 A_BomaMG_comp119484_c0_seq1
519bp
PREDICTED:_uncharacterized_protein_C1orf131_homolog_[Papilio_machaon]
GO:0044822 F RNA binding
FPKM:3.72 TPM:3.44
1779 A_BomaMG_comp11948_c0_seq1
358bp
FPKM:4.03 TPM:3.73
1780 A_BomaMG_comp11950_c0_seq1
432bp
FPKM:3.11 TPM:2.88
1781 A_BomaMG_comp11950_c1_seq1
903bp
ATP_synthase_lipid-binding_protein,_mitochondrial_[Papilio_machaon]
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008289 F lipid binding
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0033177 C proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
FPKM:2.72 TPM:2.52
1782 A_BomaMG_comp11952_c0_seq1
1562bp
PREDICTED:_leucine-zipper-like_transcriptional_regulator_1_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0005794 C Golgi apparatus
GO:0006355 P regulation of transcription, DNA-templated
GO:0009653 P anatomical structure morphogenesis
FPKM:2.18 TPM:2.02
1783 A_BomaMG_comp119534_c0_seq1
312bp
PREDICTED:_LOW_QUALITY_PROTEIN:_double-stranded_RNA-binding_protein_Staufen_homolog_2-like_[Plutella_xylostella]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006403 P RNA localization
GO:0007017 P microtubule-based process
GO:0007275 P multicellular organism development
GO:0007315 P pole plasm assembly
GO:0007316 P pole plasm RNA localization
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007318 P pole plasm protein localization
GO:0007400 P neuroblast fate determination
GO:0007616 P long-term memory
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008298 P intracellular mRNA localization
GO:0008595 P anterior/posterior axis specification, embryo
GO:0009925 C basal plasma membrane
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016324 C apical plasma membrane
GO:0019094 P pole plasm mRNA localization
GO:0035418 P protein localization to synapse
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045177 C apical part of cell
GO:0045179 C apical cortex
GO:0045180 C basal cortex
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046011 P regulation of oskar mRNA translation
GO:0046012 P positive regulation of oskar mRNA translation
GO:0048477 P oogenesis
GO:0055059 P asymmetric neuroblast division
GO:0060293 C germ plasm
GO:0071212 C subsynaptic reticulum
FPKM:6.19 TPM:5.73
1784 A_BomaMG_comp11954_c0_seq1
3210bp
PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:1.85 TPM:1.72
1785 A_BomaMG_comp11955_c0_seq1
1069bp
PREDICTED:_E3_ubiquitin-protein_ligase_TM129-like_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:2.78 TPM:2.58
1786 A_BomaMG_comp119566_c0_seq1
538bp
FPKM:1.62 TPM:1.50
1787 A_BomaMG_comp11956_c0_seq1
287bp
FPKM:3.16 TPM:2.92
1788 A_BomaMG_comp11957_c0_seq1
201bp
FPKM:1.06 TPM:0.98
1789 A_BomaMG_comp11957_c1_seq1
399bp
FPKM:4.21 TPM:3.90
1790 A_BomaMG_comp119585_c0_seq1
313bp
FPKM:3.58 TPM:3.32
1791 A_BomaMG_comp119586_c0_seq1
589bp
hypothetical_protein_M569_00248,_partial_[Genlisea_aurea]
GO:0009507 C chloroplast
GO:0009536 C plastid
FPKM:1.00 TPM:0.92
1792 A_BomaMG_comp11958_c0_seq1
238bp
FPKM:0.55 TPM:0.51
1793 A_BomaMG_comp11959_c0_seq1
309bp
integrase_family_protein_[Desulfotomaculum_acetoxidans]
FPKM:2.86 TPM:2.64
1794 A_BomaMG_comp1195_c0_seq1
339bp
hypothetical_protein,_conserved_[Babesia_bigemina]
FPKM:1.93 TPM:1.79
1795 A_BomaMG_comp11960_c0_seq1
375bp
FPKM:2.28 TPM:2.11
1796 A_BomaMG_comp11960_c1_seq1
464bp
FPKM:2.40 TPM:2.22
1797 A_BomaMG_comp119628_c0_seq1
842bp
PREDICTED:_zinc_finger_protein_271-like_[Bombyx_mori]
FPKM:3.35 TPM:3.10
1798 A_BomaMG_comp11962_c0_seq1
942bp
Required_for_meiotic_nuclear_division_protein_1-like_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0070131 P positive regulation of mitochondrial translation
FPKM:2.67 TPM:2.47
1799 A_BomaMG_comp11963_c0_seq1
1640bp
annexin_B13b_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005575 C cellular_component
GO:0007155 P cell adhesion
GO:0008360 P regulation of cell shape
FPKM:1.90 TPM:1.76
1800 A_BomaMG_comp119644_c0_seq1
1224bp
PREDICTED:_WW_domain-binding_protein_11_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0008599 F protein phosphatase regulator activity
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050699 F WW domain binding
GO:0050790 P regulation of catalytic activity
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:2.50 TPM:2.32
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