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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1711 A_BomaMG_comp11905_c0_seq1
1771bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:0.72 TPM:0.66
1712 A_BomaMG_comp11905_c0_seq2
2058bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.36 TPM:1.26
1713 A_BomaMG_comp119064_c0_seq1
448bp
FPKM:2.93 TPM:2.71
1714 A_BomaMG_comp119066_c0_seq1
1857bp
aly_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0007049 P cell cycle
GO:0017053 C transcription repressor complex
GO:0071897 P DNA biosynthetic process
FPKM:2.48 TPM:2.30
1715 A_BomaMG_comp11907_c0_seq1
2737bp
PREDICTED:_sodium-_and_chloride-dependent_glycine_transporter_1_[Amyelois_transitella]
GO:0005328 F neurotransmitter:sodium symporter activity
GO:0005332 F gamma-aminobutyric acid:sodium symporter activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007612 P learning
GO:0009636 P response to toxic substance
GO:0009744 P response to sucrose
GO:0009986 C cell surface
GO:0010033 P response to organic substance
GO:0010243 P response to organonitrogen compound
GO:0010288 P response to lead ion
GO:0014054 P positive regulation of gamma-aminobutyric acid secretion
GO:0014070 P response to organic cyclic compound
GO:0014074 P response to purine-containing compound
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0032229 P negative regulation of synaptic transmission, GABAergic
GO:0032355 P response to estradiol
GO:0042220 P response to cocaine
GO:0043005 C neuron projection
GO:0046872 F metal ion binding
GO:0051260 P protein homooligomerization
GO:0051592 P response to calcium ion
GO:0051939 P gamma-aminobutyric acid import
GO:0055085 P transmembrane transport
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
FPKM:1.89 TPM:1.75
1716 A_BomaMG_comp119081_c0_seq1
403bp
PREDICTED:_afadin_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0034332 P adherens junction organization
FPKM:3.52 TPM:3.26
1717 A_BomaMG_comp11908_c0_seq1
1557bp
PREDICTED:_uncharacterized_protein_LOC101741360_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071339 C MLL1 complex
FPKM:2.29 TPM:2.12
1718 A_BomaMG_comp119095_c0_seq1
778bp
FPKM:2.72 TPM:2.52
1719 A_BomaMG_comp11909_c0_seq1
289bp
FPKM:3.10 TPM:2.87
1720 A_BomaMG_comp11910_c0_seq1
1394bp
PREDICTED:_trifunctional_purine_biosynthetic_protein_adenosine-3_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004637 F phosphoribosylamine-glycine ligase activity
GO:0004641 F phosphoribosylformylglycinamidine cyclo-ligase activity
GO:0004644 F phosphoribosylglycinamide formyltransferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0009113 P purine nucleobase biosynthetic process
GO:0016740 F transferase activity
GO:0016742 F hydroxymethyl-, formyl- and related transferase activity
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:2.68 TPM:2.48
1721 A_BomaMG_comp11911_c0_seq1
917bp
PREDICTED:_guanylate_cyclase_32E-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004016 F adenylate cyclase activity
GO:0004383 F guanylate cyclase activity
GO:0004672 F protein kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006182 P cGMP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008074 C guanylate cyclase complex, soluble
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019934 P cGMP-mediated signaling
GO:0035556 P intracellular signal transduction
FPKM:2.21 TPM:2.05
1722 A_BomaMG_comp11911_c1_seq1
1006bp
PREDICTED:_guanylate_cyclase_32E-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004016 F adenylate cyclase activity
GO:0004383 F guanylate cyclase activity
GO:0004672 F protein kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006182 P cGMP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008074 C guanylate cyclase complex, soluble
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019934 P cGMP-mediated signaling
GO:0035556 P intracellular signal transduction
FPKM:1.93 TPM:1.79
1723 A_BomaMG_comp11912_c0_seq1
1270bp
hypothetical_protein_OBRU01_08954_[Operophtera_brumata]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0031428 C box C/D RNP complex
GO:0032040 C small-subunit processome
GO:0034511 F U3 snoRNA binding
GO:0044822 F RNA binding
FPKM:2.11 TPM:1.96
1724 A_BomaMG_comp11913_c0_seq1
747bp
PREDICTED:_BTB/POZ_domain-containing_protein_9_isoform_X2_[Bombyx_mori]
GO:0007616 P long-term memory
GO:0008344 P adult locomotory behavior
GO:0042428 P serotonin metabolic process
GO:0042748 P circadian sleep/wake cycle, non-REM sleep
GO:0048512 P circadian behavior
GO:0050951 P sensory perception of temperature stimulus
GO:0060586 P multicellular organismal iron ion homeostasis
GO:1900242 P regulation of synaptic vesicle endocytosis
FPKM:2.46 TPM:2.27
1725 A_BomaMG_comp119144_c0_seq1
460bp
PREDICTED:_diacylglycerol_kinase_theta_isoform_X3_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0019900 F kinase binding
GO:0019933 P cAMP-mediated signaling
GO:0033198 P response to ATP
GO:0033613 F DNA-binding transcription factor binding
GO:0035556 P intracellular signal transduction
GO:0043274 F phospholipase binding
GO:0046872 F metal ion binding
GO:0070493 P thrombin-activated receptor signaling pathway
GO:0070528 P protein kinase C signaling
FPKM:2.92 TPM:2.71
1726 A_BomaMG_comp11914_c0_seq1
738bp
PREDICTED:_U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0044822 F RNA binding
FPKM:3.89 TPM:3.61
1727 A_BomaMG_comp11914_c1_seq1
870bp
PREDICTED:_U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006396 P RNA processing
FPKM:2.31 TPM:2.14
1728 A_BomaMG_comp11917_c0_seq1
1105bp
PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007416 P synapse assembly
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048365 F small GTPase binding
GO:0048813 P dendrite morphogenesis
FPKM:2.64 TPM:2.44
1729 A_BomaMG_comp11917_c1_seq1
494bp
PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]
FPKM:2.39 TPM:2.21
1730 A_BomaMG_comp119189_c0_seq1
417bp
FPKM:3.02 TPM:2.80
1731 A_BomaMG_comp11918_c0_seq1
425bp
PREDICTED:_serine/threonine-protein_kinase_TBK1_[Bombyx_mori]
FPKM:3.34 TPM:3.09
1732 A_BomaMG_comp119196_c0_seq1
275bp
FPKM:0.71 TPM:0.65
1733 A_BomaMG_comp11919_c0_seq1
727bp
FPKM:2.86 TPM:2.64
1734 A_BomaMG_comp119204_c0_seq1
2606bp
PREDICTED:_NF-X1-type_zinc_finger_protein_NFXL1,_partial_[Bombyx_mori]
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
FPKM:2.10 TPM:1.95
1735 A_BomaMG_comp11920_c0_seq1
695bp
FPKM:2.37 TPM:2.20
1736 A_BomaMG_comp11921_c0_seq1
458bp
PREDICTED:_meiosis_arrest_female_protein_1_homolog_[Bombyx_mori]
FPKM:3.92 TPM:3.63
1737 A_BomaMG_comp11921_c1_seq1
1347bp
PREDICTED:_meiosis_arrest_female_protein_1_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005777 C peroxisome
GO:0010468 P regulation of gene expression
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
GO:0051321 P meiotic cell cycle
FPKM:2.53 TPM:2.34
1738 A_BomaMG_comp11923_c0_seq1
255bp
FPKM:3.50 TPM:3.24
1739 A_BomaMG_comp11924_c0_seq1
1152bp
PREDICTED:_uncharacterized_protein_LOC101741630_isoform_X4_[Bombyx_mori]
FPKM:1.88 TPM:1.74
1740 A_BomaMG_comp119255_c0_seq1
936bp
PREDICTED:_uncharacterized_protein_KIAA0195,_partial_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.84 TPM:1.70
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