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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1441 A_BomaMG_comp11707_c0_seq1
332bp
PREDICTED:_aminopeptidase_N-like_isoform_X2_[Bombyx_mori]
FPKM:3.14 TPM:2.91
1442 A_BomaMG_comp11707_c1_seq1
753bp
PREDICTED:_aminopeptidase_N-like_isoform_X2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001618 F virus receptor activity
GO:0004177 F aminopeptidase activity
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0046718 P viral entry into host cell
FPKM:2.61 TPM:2.41
1443 A_BomaMG_comp11708_c0_seq1
1000bp
PREDICTED:_LOW_QUALITY_PROTEIN:_two_pore_calcium_channel_protein_1-like_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0010008 C endosome membrane
GO:0010508 P positive regulation of autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0042802 F identical protein binding
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0072345 F NAADP-sensitive calcium-release channel activity
GO:0086010 P membrane depolarization during action potential
FPKM:0.01 TPM:0.01
1444 A_BomaMG_comp11708_c0_seq2
297bp
PREDICTED:_two_pore_calcium_channel_protein_2-like_isoform_X4_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005575 C cellular_component
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0072345 F NAADP-sensitive calcium-release channel activity
GO:0086010 P membrane depolarization during action potential
FPKM:2.03 TPM:1.88
1445 A_BomaMG_comp11708_c0_seq3
1012bp
PREDICTED:_LOW_QUALITY_PROTEIN:_two_pore_calcium_channel_protein_1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005575 C cellular_component
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0072345 F NAADP-sensitive calcium-release channel activity
GO:0086010 P membrane depolarization during action potential
FPKM:2.72 TPM:2.51
1446 A_BomaMG_comp11709_c0_seq1
1029bp
FPKM:2.08 TPM:1.92
1447 A_BomaMG_comp11709_c1_seq1
422bp
FPKM:2.82 TPM:2.61
1448 A_BomaMG_comp1170_c0_seq1
349bp
PREDICTED:_uncharacterized_protein_LOC101735330_[Bombyx_mori]
FPKM:0.81 TPM:0.75
1449 A_BomaMG_comp11711_c0_seq1
393bp
FPKM:2.40 TPM:2.23
1450 A_BomaMG_comp11713_c0_seq1
1526bp
PREDICTED:_UDP-sugar_transporter_UST74c_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0001745 P compound eye morphogenesis
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005458 F GDP-mannose transmembrane transporter activity
GO:0005459 F UDP-galactose transmembrane transporter activity
GO:0005460 F UDP-glucose transmembrane transporter activity
GO:0005461 F UDP-glucuronic acid transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0006810 P transport
GO:0007220 P Notch receptor processing
GO:0007367 P segment polarity determination
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008643 P carbohydrate transport
GO:0009880 P embryonic pattern specification
GO:0015165 F pyrimidine nucleotide-sugar transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015781 P pyrimidine nucleotide-sugar transmembrane transport
GO:0015785 P UDP-galactose transmembrane transport
GO:0015786 P UDP-glucose transmembrane transport
GO:0015787 P UDP-glucuronic acid transmembrane transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0072334 P UDP-galactose transmembrane transport
GO:0090481 P pyrimidine nucleotide-sugar transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
FPKM:2.42 TPM:2.24
1451 A_BomaMG_comp11714_c0_seq1
218bp
FPKM:0.00 TPM:0.00
1452 A_BomaMG_comp11715_c0_seq1
455bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.60 TPM:2.41
1453 A_BomaMG_comp11716_c0_seq1
576bp
hypothetical_protein_Ctob_003300_[Chrysochromulina_sp._CCMP291]
FPKM:2.83 TPM:2.62
1454 A_BomaMG_comp11717_c0_seq1
2156bp
PREDICTED:_E3_ubiquitin-protein_ligase_BRE1-like_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
FPKM:2.42 TPM:2.24
1455 A_BomaMG_comp11717_c1_seq1
219bp
FPKM:3.68 TPM:3.41
1456 A_BomaMG_comp117182_c0_seq1
592bp
PREDICTED:_translation_initiation_factor_IF-2,_mitochondrial-like_[Plutella_xylostella]
FPKM:3.63 TPM:3.36
1457 A_BomaMG_comp11718_c0_seq1
752bp
FPKM:3.26 TPM:3.02
1458 A_BomaMG_comp11718_c1_seq1
1141bp
PREDICTED:_myosin-VIIa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0008152 P metabolic process
GO:0008407 P chaeta morphogenesis
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030898 F microfilament motor activity
GO:0032027 F myosin light chain binding
GO:0035317 P imaginal disc-derived wing hair organization
GO:0048800 P antennal morphogenesis
FPKM:2.12 TPM:1.96
1459 A_BomaMG_comp11719_c0_seq1
289bp
FPKM:2.77 TPM:2.56
1460 A_BomaMG_comp1171_c0_seq1
281bp
PREDICTED:_uncharacterized_protein_LOC105842116_[Bombyx_mori]
FPKM:2.00 TPM:1.85
1461 A_BomaMG_comp1171_c1_seq1
455bp
PREDICTED:_uncharacterized_protein_K02A2.6-like_isoform_X1_[Amyelois_transitella]
FPKM:1.24 TPM:1.15
1462 A_BomaMG_comp11721_c0_seq1
208bp
FPKM:2.72 TPM:2.52
1463 A_BomaMG_comp11722_c0_seq1
461bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:4.25 TPM:3.93
1464 A_BomaMG_comp11722_c1_seq1
231bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:2.42 TPM:2.24
1465 A_BomaMG_comp11723_c0_seq1
1265bp
Pyridoxal-5'-phosphate-dependent_protein_beta_subunit_[Operophtera_brumata]
GO:0004124 F cysteine synthase activity
GO:0006535 P cysteine biosynthetic process from serine
GO:0008652 P cellular amino acid biosynthetic process
GO:0016740 F transferase activity
GO:0019344 P cysteine biosynthetic process
FPKM:1.56 TPM:1.45
1466 A_BomaMG_comp11725_c0_seq1
406bp
FPKM:2.11 TPM:1.96
1467 A_BomaMG_comp11727_c0_seq1
733bp
PREDICTED:_uncharacterized_protein_LOC101745407_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:2.76 TPM:2.56
1468 A_BomaMG_comp11728_c0_seq1
1928bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_8_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005769 C early endosome
GO:0008270 F zinc ion binding
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0046872 F metal ion binding
FPKM:2.75 TPM:2.55
1469 A_BomaMG_comp11729_c0_seq1
265bp
FPKM:5.62 TPM:5.20
1470 A_BomaMG_comp11729_c0_seq2
266bp
FPKM:2.57 TPM:2.38
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