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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1291 A_BomaMG_comp11588_c0_seq1
938bp
calcitonin_gene-related_peptide-receptor_component_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0009360 C DNA polymerase III complex
GO:0016020 C membrane
GO:0044237 P cellular metabolic process
FPKM:1.45 TPM:1.34
1292 A_BomaMG_comp11588_c0_seq2
809bp
calcitonin_gene-related_peptide-receptor_component_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0009360 C DNA polymerase III complex
GO:0016020 C membrane
GO:0044237 P cellular metabolic process
FPKM:0.84 TPM:0.78
1293 A_BomaMG_comp115907_c0_seq1
1322bp
PREDICTED:_NFX1-type_zinc_finger-containing_protein_1-like_[Papilio_polytes]
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:2.08 TPM:1.92
1294 A_BomaMG_comp11591_c0_seq1
564bp
prolyl_4-hydroxylase_alpha_subunit_precursor_[Bombyx_mori]
GO:0004656 F procollagen-proline 4-dioxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0016491 F oxidoreductase activity
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019511 P peptidyl-proline hydroxylation
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.57 TPM:2.38
1295 A_BomaMG_comp11592_c0_seq1
348bp
PREDICTED:_intraflagellar_transport_protein_20_homolog_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0030030 P cell projection organization
FPKM:2.64 TPM:2.45
1296 A_BomaMG_comp11593_c0_seq1
1783bp
PREDICTED:_solute_carrier_family_22_member_5-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.18 TPM:2.01
1297 A_BomaMG_comp115940_c0_seq1
283bp
PREDICTED:_folliculin-interacting_protein_2_[Thamnophis_sirtalis]
FPKM:3.93 TPM:3.64
1298 A_BomaMG_comp11594_c0_seq1
211bp
PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
FPKM:1.71 TPM:1.58
1299 A_BomaMG_comp11596_c0_seq1
594bp
FPKM:1.73 TPM:1.60
1300 A_BomaMG_comp11598_c0_seq1
713bp
PREDICTED:_cationic_amino_acid_transporter_2_isoform_X3_[Papilio_xuthus]
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015179 F L-amino acid transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015807 P L-amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902475 P L-alpha-amino acid transmembrane transport
FPKM:1.91 TPM:1.77
1301 A_BomaMG_comp11599_c0_seq1
265bp
hypothetical_protein_CDC7B_0196_[Corynebacterium_diphtheriae_C7_(beta)]
FPKM:2.74 TPM:2.54
1302 A_BomaMG_comp1159_c0_seq1
251bp
FPKM:0.46 TPM:0.43
1303 A_BomaMG_comp11601_c0_seq1
396bp
FPKM:2.05 TPM:1.90
1304 A_BomaMG_comp116028_c0_seq1
874bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0044822 F RNA binding
GO:0045087 P innate immune response
FPKM:3.37 TPM:3.12
1305 A_BomaMG_comp11602_c0_seq1
372bp
PREDICTED:_apolipoprotein_D-like_[Amyelois_transitella]
FPKM:2.85 TPM:2.63
1306 A_BomaMG_comp11602_c1_seq1
608bp
uncharacterized_protein_LOC106109995_precursor_[Papilio_polytes]
GO:0000302 P response to reactive oxygen species
GO:0001525 P angiogenesis
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0070062 C extracellular exosome
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
FPKM:1.51 TPM:1.40
1307 A_BomaMG_comp11603_c0_seq1
648bp
minichromosome_maintenance_complex_component_7_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030174 P regulation of DNA-dependent DNA replication initiation
GO:0042555 C MCM complex
GO:0046872 F metal ion binding
FPKM:1.74 TPM:1.61
1308 A_BomaMG_comp116041_c0_seq1
504bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841417,_partial_[Bombyx_mori]
FPKM:3.57 TPM:3.31
1309 A_BomaMG_comp11604_c0_seq1
262bp
FPKM:3.64 TPM:3.37
1310 A_BomaMG_comp11605_c0_seq1
812bp
FPKM:1.47 TPM:1.36
1311 A_BomaMG_comp11605_c0_seq2
832bp
FPKM:0.82 TPM:0.76
1312 A_BomaMG_comp11606_c0_seq1
448bp
FPKM:3.44 TPM:3.18
1313 A_BomaMG_comp11607_c0_seq1
1645bp
PREDICTED:_RUN_domain-containing_protein_1_[Amyelois_transitella]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
FPKM:1.78 TPM:1.65
1314 A_BomaMG_comp11608_c0_seq1
307bp
FPKM:2.68 TPM:2.48
1315 A_BomaMG_comp11608_c1_seq1
388bp
FPKM:1.64 TPM:1.52
1316 A_BomaMG_comp1160_c0_seq1
310bp
hypothetical_protein_[Butyrivibrio_sp._VCD2006]
FPKM:2.09 TPM:1.94
1317 A_BomaMG_comp11610_c0_seq1
1131bp
PREDICTED:_CCAAT/enhancer-binding_protein_zeta_[Amyelois_transitella]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
FPKM:1.71 TPM:1.58
1318 A_BomaMG_comp116117_c0_seq1
817bp
PREDICTED:_trypsin_CFT-1-like_[Papilio_polytes]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:3.68 TPM:3.40
1319 A_BomaMG_comp11611_c0_seq1
707bp
FPKM:2.18 TPM:2.02
1320 A_BomaMG_comp11612_c0_seq1
545bp
FPKM:2.24 TPM:2.07
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