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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1321 A_BomaMG_comp11613_c0_seq1
717bp
FPKM:1.90 TPM:1.76
1322 A_BomaMG_comp11614_c0_seq1
331bp
FPKM:3.61 TPM:3.35
1323 A_BomaMG_comp11615_c0_seq1
328bp
FPKM:2.76 TPM:2.56
1324 A_BomaMG_comp116167_c0_seq1
1398bp
PREDICTED:_polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016574 P histone ubiquitination
GO:0031490 F chromatin DNA binding
GO:0032993 C protein-DNA complex
GO:0035064 F methylated histone binding
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0043565 F sequence-specific DNA binding
GO:0045596 P negative regulation of cell differentiation
GO:0046872 F metal ion binding
FPKM:2.75 TPM:2.55
1325 A_BomaMG_comp11617_c0_seq1
461bp
FPKM:2.06 TPM:1.91
1326 A_BomaMG_comp11617_c1_seq1
802bp
FPKM:2.35 TPM:2.17
1327 A_BomaMG_comp11618_c0_seq1
723bp
putative_retransposons_RT-DIRS1:_reverse_transcriptase_family_protein,_partial_[Gregarina_niphandrodes]
FPKM:2.00 TPM:1.85
1328 A_BomaMG_comp1161_c0_seq1
216bp
PREDICTED:_pericentrin-like,_partial_[Bombyx_mori]
FPKM:3.11 TPM:2.88
1329 A_BomaMG_comp11620_c0_seq1
880bp
PREDICTED:_uncharacterized_protein_LOC106141855_[Amyelois_transitella]
FPKM:1.79 TPM:1.66
1330 A_BomaMG_comp11622_c0_seq1
1124bp
PREDICTED:_CD151_antigen_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007166 P cell surface receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031749 F D2 dopamine receptor binding
GO:0048471 C perinuclear region of cytoplasm
FPKM:1.69 TPM:1.56
1331 A_BomaMG_comp11623_c0_seq1
676bp
PREDICTED:_uncharacterized_protein_LOC101735678_[Bombyx_mori]
GO:0003231 P cardiac ventricle development
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0014704 C intercalated disc
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1903779 P regulation of cardiac conduction
FPKM:2.60 TPM:2.41
1332 A_BomaMG_comp116242_c0_seq1
253bp
PREDICTED:_nesprin-1-like_isoform_X1_[Bombyx_mori]
FPKM:9.42 TPM:8.72
1333 A_BomaMG_comp11624_c0_seq1
218bp
FPKM:3.75 TPM:3.47
1334 A_BomaMG_comp11625_c0_seq1
602bp
FPKM:1.93 TPM:1.79
1335 A_BomaMG_comp11626_c0_seq1
396bp
putative_Lysosomal_trafficking_regulator,_partial_[Operophtera_brumata]
FPKM:3.16 TPM:2.93
1336 A_BomaMG_comp11627_c0_seq1
449bp
PREDICTED:_ATP-dependent_(S)-NAD(P)H-hydrate_dehydratase-like_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0047453 F ATP-dependent NAD(P)H-hydrate dehydratase activity
GO:0052855 F ADP-dependent NAD(P)H-hydrate dehydratase activity
FPKM:1.14 TPM:1.06
1337 A_BomaMG_comp11627_c1_seq1
781bp
ATP-dependent_(S)-NAD(P)H-hydrate_dehydratase,_partial_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0047453 F ATP-dependent NAD(P)H-hydrate dehydratase activity
GO:0052855 F ADP-dependent NAD(P)H-hydrate dehydratase activity
FPKM:2.03 TPM:1.88
1338 A_BomaMG_comp11628_c0_seq1
754bp
PREDICTED:_zinc_finger_and_SCAN_domain-containing_protein_12-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0006979 P response to oxidative stress
GO:0008270 F zinc ion binding
GO:0009408 P response to heat
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0048149 P behavioral response to ethanol
GO:0071567 F UFM1 hydrolase activity
FPKM:2.60 TPM:2.41
1339 A_BomaMG_comp116298_c0_seq1
1475bp
putative_serine/threonine_protein_kinase_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000793 C condensed chromosome
GO:0000910 P cytokinesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005876 C spindle microtubule
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007283 P spermatogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0032133 C chromosome passenger complex
GO:0032465 P regulation of cytokinesis
GO:0035174 F histone serine kinase activity
GO:0035404 P histone-serine phosphorylation
GO:0048599 P oocyte development
GO:0051233 C spindle midzone
GO:0051255 P spindle midzone assembly
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
FPKM:1.96 TPM:1.82
1340 A_BomaMG_comp11629_c0_seq1
357bp
FPKM:1.54 TPM:1.43
1341 A_BomaMG_comp1162_c0_seq1
204bp
FPKM:4.94 TPM:4.57
1342 A_BomaMG_comp11631_c0_seq1
532bp
FPKM:1.45 TPM:1.34
1343 A_BomaMG_comp11631_c0_seq2
465bp
FPKM:2.87 TPM:2.66
1344 A_BomaMG_comp11631_c0_seq3
465bp
FPKM:0.00 TPM:0.00
1345 A_BomaMG_comp11632_c0_seq1
360bp
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_son_of_sevenless_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007015 P actin filament organization
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008293 P torso signaling pathway
GO:0008360 P regulation of cell shape
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016199 P axon midline choice point recognition
GO:0030154 P cell differentiation
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035022 P positive regulation of Rac protein signal transduction
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0045500 P sevenless signaling pathway
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046982 F protein heterodimerization activity
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
FPKM:4.36 TPM:4.04
1346 A_BomaMG_comp116330_c0_seq1
660bp
PREDICTED:_tyrosine-protein_phosphatase_non-receptor_type_4_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0008092 F cytoskeletal protein binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:2.90 TPM:2.69
1347 A_BomaMG_comp11633_c0_seq1
263bp
PREDICTED:_aquaporin_AQPAe.a-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:7.60 TPM:7.04
1348 A_BomaMG_comp11634_c0_seq1
704bp
PREDICTED:_uncharacterized_protein_LOC106137902_[Amyelois_transitella]
FPKM:1.94 TPM:1.80
1349 A_BomaMG_comp11635_c0_seq1
1337bp
FPKM:1.82 TPM:1.68
1350 A_BomaMG_comp11636_c0_seq1
360bp
hypothetical_protein_DFA_06121_[Dictyostelium_fasciculatum]
FPKM:3.79 TPM:3.51
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