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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1261 A_BomaMG_comp11561_c0_seq1
654bp
PREDICTED:_leucine-zipper-like_transcriptional_regulator_1_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0005794 C Golgi apparatus
GO:0006355 P regulation of transcription, DNA-templated
GO:0009653 P anatomical structure morphogenesis
FPKM:2.08 TPM:1.93
1262 A_BomaMG_comp11562_c0_seq1
720bp
FPKM:2.20 TPM:2.04
1263 A_BomaMG_comp11563_c0_seq1
318bp
FPKM:0.99 TPM:0.91
1264 A_BomaMG_comp11563_c1_seq1
616bp
FPKM:1.72 TPM:1.59
1265 A_BomaMG_comp11564_c0_seq1
285bp
hypothetical_protein_[Diplosphaera_colitermitum]
FPKM:2.57 TPM:2.38
1266 A_BomaMG_comp11565_c0_seq1
317bp
FPKM:1.99 TPM:1.84
1267 A_BomaMG_comp11565_c1_seq1
270bp
FPKM:2.23 TPM:2.06
1268 A_BomaMG_comp11566_c0_seq1
527bp
PREDICTED:_sodium-independent_sulfate_anion_transporter-like_isoform_X2_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
FPKM:2.35 TPM:2.18
1269 A_BomaMG_comp11567_c0_seq1
430bp
PREDICTED:_venom_acid_phosphatase_Acph-1-like_isoform_X1_[Bombyx_mori]
FPKM:2.59 TPM:2.40
1270 A_BomaMG_comp115682_c0_seq1
271bp
PREDICTED:_prominin-like_protein_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0048812 P neuron projection morphogenesis
FPKM:8.09 TPM:7.49
1271 A_BomaMG_comp115699_c0_seq1
609bp
FPKM:2.46 TPM:2.28
1272 A_BomaMG_comp11569_c0_seq1
287bp
PREDICTED:_uncharacterized_protein_LOC106136576_isoform_X2_[Amyelois_transitella]
FPKM:0.63 TPM:0.58
1273 A_BomaMG_comp11569_c1_seq1
1065bp
PREDICTED:_cell_adhesion_molecule_2-like,_partial_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
FPKM:1.38 TPM:1.28
1274 A_BomaMG_comp11570_c0_seq1
223bp
FPKM:2.06 TPM:1.91
1275 A_BomaMG_comp115711_c0_seq1
317bp
FPKM:1.24 TPM:1.15
1276 A_BomaMG_comp11571_c0_seq1
639bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
GO:0000785 C chromatin
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018991 P oviposition
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0035035 F histone acetyltransferase binding
GO:0042054 F histone methyltransferase activity
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0051567 P histone H3-K9 methylation
GO:0051568 P histone H3-K4 methylation
FPKM:0.25 TPM:0.23
1277 A_BomaMG_comp11571_c0_seq2
1170bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
GO:0002674 P negative regulation of acute inflammatory response
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005923 C bicellular tight junction
GO:0006323 P DNA packaging
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007267 P cell-cell signaling
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030054 C cell junction
GO:0032259 P methylation
GO:0032635 P interleukin-6 production
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043409 P negative regulation of MAPK cascade
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0050728 P negative regulation of inflammatory response
GO:0051568 P histone H3-K4 methylation
GO:0070062 C extracellular exosome
GO:0097676 P histone H3-K36 dimethylation
FPKM:1.77 TPM:1.64
1278 A_BomaMG_comp11574_c0_seq1
533bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.03 TPM:1.88
1279 A_BomaMG_comp11574_c1_seq1
935bp
FPKM:2.16 TPM:2.00
1280 A_BomaMG_comp11575_c0_seq1
426bp
FPKM:2.36 TPM:2.18
1281 A_BomaMG_comp11578_c0_seq1
1001bp
PREDICTED:_uncharacterized_protein_LOC101746612_isoform_X2_[Bombyx_mori]
FPKM:1.82 TPM:1.68
1282 A_BomaMG_comp1157_c0_seq1
310bp
hypothetical_protein_JCGZ_24461_[Jatropha_curcas]
FPKM:1.57 TPM:1.45
1283 A_BomaMG_comp11580_c0_seq1
1431bp
FPKM:2.71 TPM:2.51
1284 A_BomaMG_comp11580_c1_seq1
411bp
FPKM:1.92 TPM:1.78
1285 A_BomaMG_comp115814_c0_seq1
301bp
FPKM:0.84 TPM:0.78
1286 A_BomaMG_comp11581_c0_seq1
784bp
PREDICTED:_zinc_finger_protein_271-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000975 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0001710 P mesodermal cell fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007370 P ventral furrow formation
GO:0007375 P anterior midgut invagination
GO:0007417 P central nervous system development
GO:0007443 P Malpighian tubule morphogenesis
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007498 P mesoderm development
GO:0007499 P ectoderm and mesoderm interaction
GO:0007500 P mesodermal cell fate determination
GO:0007501 P mesodermal cell fate specification
GO:0007517 P muscle organ development
GO:0009950 P dorsal/ventral axis specification
GO:0010004 P gastrulation involving germ band extension
GO:0010629 P negative regulation of gene expression
GO:0031065 P positive regulation of histone deacetylation
GO:0034332 P adherens junction organization
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0055059 P asymmetric neuroblast division
GO:0070491 F DNA-binding transcription factor binding
FPKM:2.19 TPM:2.03
1287 A_BomaMG_comp11582_c0_seq1
1533bp
PREDICTED:_yellow-d_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
FPKM:2.00 TPM:1.85
1288 A_BomaMG_comp115832_c0_seq1
1159bp
PREDICTED:_uncharacterized_protein_LOC106107340_isoform_X1_[Papilio_polytes]
FPKM:2.74 TPM:2.53
1289 A_BomaMG_comp11587_c0_seq1
218bp
FPKM:2.25 TPM:2.08
1290 A_BomaMG_comp11587_c1_seq1
640bp
FPKM:1.55 TPM:1.44
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