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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1231 A_BomaMG_comp11534_c1_seq1
325bp
FPKM:5.41 TPM:5.01
1232 A_BomaMG_comp11535_c0_seq1
376bp
FPKM:1.05 TPM:0.97
1233 A_BomaMG_comp11536_c0_seq1
297bp
hypothetical_protein_MYCGRDRAFT_97710_[Zymoseptoria_tritici_IPO323]
FPKM:0.29 TPM:0.27
1234 A_BomaMG_comp11538_c0_seq1
963bp
PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:2.34 TPM:2.17
1235 A_BomaMG_comp11539_c0_seq1
361bp
PREDICTED:_myotubularin-related_protein_5_[Bombyx_mori]
FPKM:2.07 TPM:1.92
1236 A_BomaMG_comp1153_c0_seq1
204bp
PREDICTED:_LOW_QUALITY_PROTEIN:_microsomal_glutathione_S-transferase_2_[Serinus_canaria]
FPKM:0.99 TPM:0.91
1237 A_BomaMG_comp11540_c0_seq1
254bp
hypothetical_protein_[Methylopila_sp._M107]
FPKM:0.44 TPM:0.41
1238 A_BomaMG_comp11541_c0_seq1
261bp
hypothetical_protein_KGM_02497_[Danaus_plexippus]
GO:0001401 C SAM complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019867 C outer membrane
GO:0033108 P mitochondrial respiratory chain complex assembly
GO:0042407 P cristae formation
GO:0045040 P protein insertion into mitochondrial outer membrane
GO:0070062 C extracellular exosome
FPKM:5.32 TPM:4.92
1239 A_BomaMG_comp115426_c0_seq1
1038bp
PREDICTED:_uncharacterized_protein_LOC101737309_isoform_X2_[Bombyx_mori]
FPKM:2.21 TPM:2.05
1240 A_BomaMG_comp11545_c0_seq1
595bp
FPKM:2.29 TPM:2.12
1241 A_BomaMG_comp11546_c0_seq1
312bp
FPKM:2.58 TPM:2.39
1242 A_BomaMG_comp11548_c0_seq1
696bp
Lix1_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0097352 P autophagosome maturation
FPKM:2.24 TPM:2.07
1243 A_BomaMG_comp11549_c0_seq1
224bp
PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:0.68 TPM:0.63
1244 A_BomaMG_comp11549_c1_seq1
210bp
FPKM:3.49 TPM:3.23
1245 A_BomaMG_comp1154_c0_seq1
243bp
PREDICTED:_uncharacterized_protein_LOC106141305_[Amyelois_transitella]
FPKM:2.55 TPM:2.36
1246 A_BomaMG_comp115507_c0_seq1
260bp
hypothetical_protein_RF11_15293_[Thelohanellus_kitauei]
FPKM:2.07 TPM:1.91
1247 A_BomaMG_comp11550_c0_seq1
1413bp
PREDICTED:_methyltransferase-like_protein_4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
FPKM:1.98 TPM:1.83
1248 A_BomaMG_comp11551_c0_seq1
203bp
PREDICTED:_cytokine_receptor_common_subunit_beta,_partial_[Tyto_alba]
FPKM:1.01 TPM:0.94
1249 A_BomaMG_comp11552_c0_seq1
883bp
PREDICTED:_uncharacterized_protein_LOC101735441_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0031965 C nuclear membrane
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0035886 P vascular associated smooth muscle cell differentiation
GO:0040008 P regulation of growth
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0045814 P negative regulation of gene expression, epigenetic
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
FPKM:2.22 TPM:2.06
1250 A_BomaMG_comp11553_c0_seq1
1802bp
PREDICTED:_serine/threonine-protein_kinase_tricorner_isoform_X3_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0022416 P chaeta development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0035317 P imaginal disc-derived wing hair organization
GO:0035556 P intracellular signal transduction
GO:0040018 P positive regulation of multicellular organism growth
GO:0044297 C cell body
GO:0046872 F metal ion binding
GO:0048800 P antennal morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050773 P regulation of dendrite development
GO:0070451 C cell hair
GO:0070593 P dendrite self-avoidance
GO:0071944 C cell periphery
FPKM:1.94 TPM:1.80
1251 A_BomaMG_comp11554_c0_seq1
609bp
PREDICTED:_uncharacterized_protein_LOC101741471_isoform_X2_[Bombyx_mori]
GO:0001503 P ossification
GO:0002080 C acrosomal membrane
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0005639 C integral component of nuclear inner membrane
GO:0005737 C cytoplasm
GO:0006998 P nuclear envelope organization
GO:0007129 P homologous chromosome pairing at meiosis
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
FPKM:2.22 TPM:2.05
1252 A_BomaMG_comp11555_c0_seq1
1100bp
hypothetical_protein_KGM_08247_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005881 C cytoplasmic microtubule
GO:0008150 P biological_process
GO:0015630 C microtubule cytoskeleton
FPKM:1.88 TPM:1.74
1253 A_BomaMG_comp11556_c0_seq1
990bp
FPKM:2.60 TPM:2.40
1254 A_BomaMG_comp11556_c1_seq1
407bp
FPKM:2.86 TPM:2.65
1255 A_BomaMG_comp11557_c0_seq1
1342bp
FPKM:1.85 TPM:1.71
1256 A_BomaMG_comp11558_c0_seq1
451bp
PREDICTED:_serine_racemase-like_[Bombyx_mori]
FPKM:1.76 TPM:1.63
1257 A_BomaMG_comp11558_c1_seq1
258bp
FPKM:1.69 TPM:1.57
1258 A_BomaMG_comp11559_c0_seq1
430bp
PREDICTED:_WD_repeat-containing_protein_81_isoform_X3_[Bombyx_mori]
GO:0000132 P establishment of mitotic spindle orientation
GO:0000776 C kinetochore
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0007097 P nuclear migration
GO:0007281 P germ cell development
GO:0008017 F microtubule binding
GO:0008090 P retrograde axonal transport
GO:0010923 P negative regulation of phosphatase activity
GO:0022008 P neurogenesis
GO:0031023 P microtubule organizing center organization
GO:0045502 F dynein complex binding
GO:0047496 P vesicle transport along microtubule
GO:1904115 C axon cytoplasm
GO:2000574 P obsolete regulation of microtubule motor activity
FPKM:2.59 TPM:2.40
1259 A_BomaMG_comp1155_c0_seq1
309bp
PREDICTED:_neuropathy_target_esterase_sws_isoform_X3_[Bombyx_mori]
GO:0004622 F lysophospholipase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006643 P membrane lipid metabolic process
GO:0006644 P phospholipid metabolic process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007420 P brain development
GO:0007608 P sensory perception of smell
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0032502 P developmental process
GO:0034349 P glial cell apoptotic process
GO:0045494 P photoreceptor cell maintenance
GO:0046470 P phosphatidylcholine metabolic process
GO:0051402 P neuron apoptotic process
GO:0061024 P membrane organization
FPKM:1.84 TPM:1.71
1260 A_BomaMG_comp11560_c0_seq1
208bp
FPKM:0.91 TPM:0.84
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