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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
661 A_SariMSG_c10893_g1_i1
2264bp
programmed_cell_death_6-interacting_protein_[Bombyx_mori]
GO:0006810 P transport
GO:0015031 P protein transport
FPKM:16.83 TPM:10.74
662 A_SariMSG_c10894_g1_i1
280bp
FPKM:0.00 TPM:0.00
663 A_SariMSG_c10894_g1_i2
257bp
FPKM:1.15 TPM:0.74
664 A_SariMSG_c10895_g1_i1
661bp
kinesin-like_protein_Klp68D_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
FPKM:1.33 TPM:0.85
665 A_SariMSG_c10896_g1_i1
270bp
Diphosphomevalonate_decarboxylase,_partial_[Operophtera_brumata]
FPKM:5.15 TPM:3.29
666 A_SariMSG_c1089_g1_i1
268bp
FPKM:2.09 TPM:1.34
667 A_SariMSG_c10900_g1_i1
202bp
FPKM:13.42 TPM:8.56
668 A_SariMSG_c10901_g1_i1
626bp
nucleoplasmin_isoform_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006338 P chromatin remodeling
GO:0016584 P nucleosome positioning
GO:0035041 P sperm DNA decondensation
GO:0042393 F histone binding
GO:0042623 F ATP hydrolysis activity
FPKM:2.86 TPM:1.83
669 A_SariMSG_c10902_g1_i1
517bp
FPKM:2.53 TPM:1.62
670 A_SariMSG_c10903_g1_i1
1390bp
protein_tramtrack,_beta_isoform-like_isoform_X18_[Helicoverpa_armigera]
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005730 C nucleolus
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0007060 P male meiosis chromosome segregation
GO:0007141 P male meiosis I
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0010032 P meiotic chromosome condensation
GO:0016311 P dephosphorylation
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
FPKM:269.02 TPM:171.70
671 A_SariMSG_c10904_g1_i1
427bp
kelch_domain-containing_protein_3_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0051321 P meiotic cell cycle
FPKM:23.27 TPM:14.85
672 A_SariMSG_c10905_g1_i1
256bp
FPKM:2.33 TPM:1.48
673 A_SariMSG_c10906_g1_i1
474bp
ecdysteroid-inducible_angiotensin-converting_enzyme-related_gene_product_isoform_X2_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007289 P spermatid nucleus differentiation
GO:0007291 P sperm individualization
GO:0007552 P metamorphosis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008241 F peptidyl-dipeptidase activity
GO:0008270 F zinc ion binding
GO:0009609 P response to symbiotic bacterium
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:2.57 TPM:1.64
674 A_SariMSG_c10906_g1_i2
486bp
ecdysteroid-inducible_angiotensin-converting_enzyme-related_gene_product_isoform_X2_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007289 P spermatid nucleus differentiation
GO:0007291 P sperm individualization
GO:0007552 P metamorphosis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008241 F peptidyl-dipeptidase activity
GO:0008270 F zinc ion binding
GO:0009609 P response to symbiotic bacterium
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:1.40 TPM:0.89
675 A_SariMSG_c10907_g1_i1
594bp
FPKM:2.23 TPM:1.43
676 A_SariMSG_c10908_g1_i1
419bp
PREDICTED:_pre-mRNA_cleavage_complex_2_protein_Pcf11_[Plutella_xylostella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
FPKM:3.23 TPM:2.06
677 A_SariMSG_c10909_g1_i1
832bp
PREDICTED:_charged_multivesicular_body_protein_2b-B_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007034 P vacuolar transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031902 C late endosome membrane
FPKM:7.54 TPM:4.81
678 A_SariMSG_c10911_g1_i1
515bp
Usher_syndrome_type-1G_protein_homolog_[Bombyx_mori]
FPKM:1.19 TPM:0.76
679 A_SariMSG_c10914_g1_i1
645bp
PREDICTED:_ras-related_GTP-binding_protein_C_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007050 P regulation of cell cycle
GO:0007264 P small GTPase mediated signal transduction
GO:0008380 P RNA splicing
GO:0010506 P regulation of autophagy
GO:0016049 P cell growth
GO:0016236 P macroautophagy
GO:0019003 F GDP binding
GO:0032006 P regulation of TOR signaling
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0034448 C Ragulator complex
GO:0034613 P cellular protein localization
GO:0043231 C intracellular membrane-bounded organelle
GO:0046982 F protein heterodimerization activity
GO:0071230 P cellular response to amino acid stimulus
GO:1990131 C Gtr1-Gtr2 GTPase complex
FPKM:34.06 TPM:21.74
680 A_SariMSG_c10915_g1_i1
1233bp
high_affinity_copper_uptake_protein_1-like_[Helicoverpa_armigera]
GO:0005375 F copper ion transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
FPKM:82.37 TPM:52.57
681 A_SariMSG_c10917_g1_i1
235bp
FPKM:0.72 TPM:0.46
682 A_SariMSG_c10918_g1_i1
561bp
ribosomal_protein_S11_isoform_2_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005925 C focal adhesion
GO:0006412 P translation
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0019843 F rRNA binding
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
FPKM:820.90 TPM:523.93
683 A_SariMSG_c10919_g1_i1
243bp
FPKM:1.98 TPM:1.26
684 A_SariMSG_c10920_g1_i1
673bp
transmembrane_protein_234_homolog_isoform_X1_[Helicoverpa_armigera]
GO:0005887 C integral component of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.71 TPM:1.73
685 A_SariMSG_c10920_g1_i2
255bp
FPKM:0.69 TPM:0.44
686 A_SariMSG_c10921_g1_i1
223bp
FPKM:4.97 TPM:3.17
687 A_SariMSG_c10922_g1_i1
711bp
FPKM:3.76 TPM:2.40
688 A_SariMSG_c10924_g1_i1
228bp
FPKM:3.12 TPM:1.99
689 A_SariMSG_c10925_g1_i1
759bp
probable_small_nuclear_ribonucleoprotein_Sm_D1_[Papilio_xuthus]
GO:0000243 C commitment complex
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005685 C U1 snRNP
GO:0005686 C U2 snRNP
GO:0005687 C U4 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0034715 C pICln-Sm protein complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
GO:0071010 C prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0097526 C spliceosomal tri-snRNP complex
FPKM:41.42 TPM:26.44
690 A_SariMSG_c10926_g1_i1
342bp
FPKM:1.29 TPM:0.82
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