SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/50247
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
631 A_SariMSG_c10861_g1_i1
309bp
FPKM:4.28 TPM:2.73
632 A_SariMSG_c10862_g1_i1
269bp
FPKM:3.11 TPM:1.99
633 A_SariMSG_c10863_g1_i1
637bp
simila_to_CG7484_[Papilio_polytes]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
FPKM:40.73 TPM:25.99
634 A_SariMSG_c10864_g1_i1
272bp
uncharacterized_protein_LOC101742950_[Bombyx_mori]
FPKM:0.51 TPM:0.32
635 A_SariMSG_c10865_g1_i1
231bp
FPKM:1.50 TPM:0.96
636 A_SariMSG_c10866_g1_i1
364bp
FPKM:0.87 TPM:0.55
637 A_SariMSG_c10868_g1_i1
220bp
FPKM:3.44 TPM:2.20
638 A_SariMSG_c10869_g1_i1
421bp
FPKM:3.20 TPM:2.04
639 A_SariMSG_c10870_g1_i1
808bp
protein_RER1_isoform_X1_[Helicoverpa_armigera]
GO:0000139 C Golgi membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007528 P neuromuscular junction development
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0033130 F acetylcholine receptor binding
GO:0071340 P skeletal muscle acetylcholine-gated channel clustering
GO:0090004 P positive regulation of protein localization to plasma membrane
FPKM:29.67 TPM:18.94
640 A_SariMSG_c10871_g1_i1
1433bp
phosphoserine_aminotransferase_[Antheraea_pernyi]
GO:0003824 F catalytic activity
GO:0004648 F O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO:0006564 P L-serine biosynthetic process
GO:0008483 F transaminase activity
GO:0008615 P pyridoxine biosynthetic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016740 F transferase activity
FPKM:37.69 TPM:24.05
641 A_SariMSG_c10872_g1_i1
203bp
RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Habropoda_laboriosa]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:4.40 TPM:2.81
642 A_SariMSG_c10873_g1_i1
213bp
FPKM:0.00 TPM:0.00
643 A_SariMSG_c10873_g2_i1
376bp
uncharacterized_protein_LOC110385135_[Bombyx_mori]
FPKM:1.64 TPM:1.05
644 A_SariMSG_c10875_g1_i1
1247bp
rotatin-like_[Helicoverpa_armigera]
FPKM:2.49 TPM:1.59
645 A_SariMSG_c10876_g1_i1
205bp
FPKM:24.52 TPM:15.65
646 A_SariMSG_c10877_g1_i1
332bp
FPKM:3.40 TPM:2.17
647 A_SariMSG_c10877_g1_i2
269bp
FPKM:0.00 TPM:0.00
648 A_SariMSG_c10878_g1_i1
470bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
FPKM:2.32 TPM:1.48
649 A_SariMSG_c10879_g1_i1
392bp
FPKM:3.07 TPM:1.96
650 A_SariMSG_c10880_g1_i1
860bp
PREDICTED:_TBC1_domain_family_member_16_[Papilio_polytes]
GO:0001919 P regulation of receptor recycling
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
FPKM:1.48 TPM:0.95
651 A_SariMSG_c10881_g1_i1
287bp
FPKM:2.26 TPM:1.44
652 A_SariMSG_c10883_g1_i1
205bp
FPKM:2.13 TPM:1.36
653 A_SariMSG_c10884_g1_i1
305bp
FPKM:0.80 TPM:0.51
654 A_SariMSG_c10886_g1_i1
821bp
G-protein_coupled_receptor_143-like_[Helicoverpa_armigera]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006726 P eye pigment biosynthetic process
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0032400 P melanosome localization
GO:0032402 P melanosome transport
GO:0032438 P melanosome organization
GO:0033162 C melanosome membrane
GO:0035240 F dopamine binding
GO:0035584 P calcium-mediated signaling using intracellular calcium source
GO:0035643 F L-DOPA receptor activity
GO:0042470 C melanosome
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0050848 P regulation of calcium-mediated signaling
GO:0072544 F L-DOPA binding
GO:0072545 F tyrosine binding
GO:1902908 P regulation of melanosome transport
GO:1903056 P regulation of melanosome organization
FPKM:2.40 TPM:1.53
655 A_SariMSG_c10887_g1_i1
294bp
FPKM:6.02 TPM:3.84
656 A_SariMSG_c10888_g1_i1
302bp
Suppressor_of_cytokine_signaling_7_[Papilio_xuthus]
FPKM:2.04 TPM:1.30
657 A_SariMSG_c1088_g1_i1
254bp
PREDICTED:_vinculin_[Amyelois_transitella]
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006909 P phagocytosis
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
FPKM:2.96 TPM:1.89
658 A_SariMSG_c10890_g1_i1
279bp
group_XV_phospholipase_A2-like_[Helicoverpa_armigera]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006650 P glycerophospholipid metabolic process
GO:0006672 P ceramide metabolic process
GO:0008374 F O-acyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0034638 P phosphatidylcholine catabolic process
GO:0046338 P phosphatidylethanolamine catabolic process
GO:0047499 F calcium-independent phospholipase A2 activity
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
659 A_SariMSG_c10890_g1_i2
268bp
group_XV_phospholipase_A2-like_[Helicoverpa_armigera]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006650 P glycerophospholipid metabolic process
GO:0006672 P ceramide metabolic process
GO:0008374 F O-acyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0034638 P phosphatidylcholine catabolic process
GO:0046338 P phosphatidylethanolamine catabolic process
GO:0047499 F calcium-independent phospholipase A2 activity
GO:0070062 C extracellular exosome
FPKM:4.19 TPM:2.67
660 A_SariMSG_c10892_g1_i1
415bp
microtubule-associated_protein_futsch-like_[Bombyx_mori]
FPKM:2.34 TPM:1.49
previous next from show/50247

- SilkBase 1999-2023 -