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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1711 A_SariMSG_c11998_g1_i1
321bp
zinc_finger_protein_77_isoform_X1_[Bombyx_mori]
FPKM:2.90 TPM:1.85
1712 A_SariMSG_c11999_g1_i1
651bp
Bone_morphogenetic_protein_receptor_type-1B_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0002063 P chondrocyte development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030166 P proteoglycan biosynthetic process
GO:0030509 P BMP signaling pathway
GO:0032332 P positive regulation of chondrocyte differentiation
GO:0044214 C spanning component of plasma membrane
GO:0046872 F metal ion binding
GO:0051216 P cartilage development
GO:0060350 P endochondral bone morphogenesis
GO:0061036 P positive regulation of cartilage development
GO:0071363 P cellular response to growth factor stimulus
GO:1902731 P negative regulation of chondrocyte proliferation
FPKM:4.82 TPM:3.08
1713 A_SariMSG_c119_g1_i1
1296bp
uncharacterized_protein_LOC101744659_[Bombyx_mori]
GO:0000323 C lytic vacuole
GO:0005537 F mannose binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015578 F mannose transmembrane transporter activity
GO:0015761 P mannose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033299 P secretion of lysosomal enzymes
GO:0048471 C perinuclear region of cytoplasm
FPKM:44.30 TPM:28.28
1714 A_SariMSG_c11_g1_i1
214bp
FPKM:0.93 TPM:0.60
1715 A_SariMSG_c12000_g1_i1
376bp
FPKM:4.11 TPM:2.62
1716 A_SariMSG_c12001_g1_i1
882bp
Valyl-tRNA_synthetase_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
FPKM:3.39 TPM:2.16
1717 A_SariMSG_c12003_g1_i1
637bp
PREDICTED:_protein_furry-like,_partial_[Plutella_xylostella]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008407 P chaeta morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030427 C site of polarized growth
GO:0035316 P non-sensory hair organization
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042052 P rhabdomere development
GO:0044297 C cell body
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048601 P oocyte morphogenesis
GO:0048800 P antennal morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050773 P regulation of dendrite development
GO:0070593 P dendrite self-avoidance
GO:0090527 P actin filament reorganization
FPKM:3.69 TPM:2.36
1718 A_SariMSG_c12005_g1_i1
225bp
PREDICTED:_putative_ferric-chelate_reductase_1_homolog_[Amyelois_transitella]
GO:0000293 F ferric-chelate reductase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.23 TPM:2.06
1719 A_SariMSG_c12006_g1_i1
225bp
FPKM:4.85 TPM:3.10
1720 A_SariMSG_c12007_g1_i1
755bp
uncharacterized_protein_LOC110379888_[Helicoverpa_armigera]
FPKM:3.07 TPM:1.96
1721 A_SariMSG_c12008_g1_i1
337bp
FPKM:6.96 TPM:4.44
1722 A_SariMSG_c12009_g1_i1
461bp
FPKM:8.37 TPM:5.34
1723 A_SariMSG_c1200_g1_i1
206bp
FPKM:4.20 TPM:2.68
1724 A_SariMSG_c12010_g1_i1
291bp
beta-1,4-N-acetylgalactosaminyltransferase_bre-4-like_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0003945 F N-acetyllactosamine synthase activity
GO:0004461 F lactose synthase activity
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006486 P protein glycosylation
GO:0008378 F galactosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018146 P keratan sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
FPKM:4.39 TPM:2.80
1725 A_SariMSG_c12012_g1_i1
398bp
PREDICTED:_uncharacterized_protein_LOC106108964_[Papilio_polytes]
FPKM:12.99 TPM:8.29
1726 A_SariMSG_c12014_g1_i1
284bp
FPKM:0.00 TPM:0.00
1727 A_SariMSG_c12014_g1_i2
422bp
FPKM:1.59 TPM:1.02
1728 A_SariMSG_c12016_g1_i1
739bp
uncharacterized_protein_LOC110378779_isoform_X5_[Helicoverpa_armigera]
FPKM:3.16 TPM:2.01
1729 A_SariMSG_c12016_g1_i2
224bp
FPKM:0.00 TPM:0.00
1730 A_SariMSG_c12017_g1_i1
230bp
FPKM:3.04 TPM:1.94
1731 A_SariMSG_c12018_g1_i1
248bp
FPKM:1.88 TPM:1.20
1732 A_SariMSG_c12019_g1_i1
1035bp
PREDICTED:_transcription_initiation_factor_IIB_isoform_X1_[Papilio_xuthus]
GO:0001174 P transcriptional start site selection at RNA polymerase II promoter
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
GO:0051101 P regulation of DNA binding
GO:0097550 C transcription preinitiation complex
FPKM:3.28 TPM:2.10
1733 A_SariMSG_c12019_g1_i2
956bp
PREDICTED:_transcription_initiation_factor_IIB_isoform_X1_[Papilio_xuthus]
GO:0001174 P transcriptional start site selection at RNA polymerase II promoter
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
GO:0051101 P regulation of DNA binding
GO:0097550 C transcription preinitiation complex
FPKM:13.62 TPM:8.69
1734 A_SariMSG_c12020_g1_i1
924bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_11_[Amyelois_transitella]
GO:0001104 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007517 P muscle organ development
GO:0016592 C mediator complex
GO:0048813 P dendrite morphogenesis
FPKM:5.29 TPM:3.37
1735 A_SariMSG_c12021_g1_i1
621bp
actin_related_protein_2/3_complex_subunit_4_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005885 C Arp2/3 protein complex
GO:0015629 C actin cytoskeleton
GO:0019899 F enzyme binding
GO:0030041 P actin filament polymerization
GO:0030674 F protein-macromolecule adaptor activity
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
FPKM:18.95 TPM:12.09
1736 A_SariMSG_c12021_g1_i2
355bp
actin_related_protein_2/3_complex_subunit_4_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005885 C Arp2/3 protein complex
GO:0015629 C actin cytoskeleton
GO:0019899 F enzyme binding
GO:0030041 P actin filament polymerization
GO:0030674 F protein-macromolecule adaptor activity
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
1737 A_SariMSG_c12022_g1_i1
562bp
timeout_[Danaus_plexippus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0002009 P morphogenesis of an epithelium
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007623 P circadian rhythm
GO:0009582 P detection of abiotic stimulus
GO:0009628 P response to abiotic stimulus
GO:0015630 C microtubule cytoskeleton
GO:0030324 P lung development
GO:0042127 P regulation of cell population proliferation
GO:0042752 P regulation of circadian rhythm
GO:0042803 F protein homodimerization activity
GO:0044770 P cell cycle phase transition
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
GO:0048511 P rhythmic process
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0051301 P cell division
FPKM:4.06 TPM:2.59
1738 A_SariMSG_c12023_g1_i1
827bp
nuclear_cap-binding_protein_subunit_2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000339 F RNA cap binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005846 C nuclear cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0031047 P gene silencing by RNA
GO:0045292 P mRNA cis splicing, via spliceosome
FPKM:26.09 TPM:16.65
1739 A_SariMSG_c12024_g1_i1
623bp
FPKM:1.83 TPM:1.17
1740 A_SariMSG_c12025_g1_i1
341bp
tripartite_motif-containing_protein_2-like_[Helicoverpa_armigera]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0043523 P regulation of neuron apoptotic process
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
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