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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c12019_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_IIB_isoform_X1_[Papilio_xuthus]
Ontology
GO:0001174 P transcriptional start site selection at RNA polymerase II promoter
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
GO:0051101 P regulation of DNA binding
GO:0097550 C transcription preinitiation complex
Transcript
Level		FPKM:13.62 TPM:8.69
ORF EntryO_SariMSG2586_internal:A_SariMSG_c12019_g1_i2
Sequence
(Nucleotide)
TGCTCTTCCGATCTATGGCGAGCACGTCGAGAATGGAGACTAACAAGGTGGTGTGCTACG
CGCATCCAGACGCACCTCTCATTGAGGATTACAGAGCTGGTGACATGATATGTTCAGAAT
GCGGACTGGTAGTTGGTGATAGAGTTATTGATGTTGGTTCAGAATGGAGAACATTCAGCA
ATGAAAAATCTGGTGTTGATCCCTCTCGTGTTGGTGGACCAGAGAATCCATTATTATCAG
GAGGTGATCTCTCTACAATCATTGGTCCAGGGAGGGGTGATGCATCATTTGACAGTTTTG
GTGTCTCGAAATACCAGAACAGGAGGAATATAAGCAGTACTGATAGGGCTCTAATTAATG
CATTCCGTGAAATAAACACAATGGCTGATCGTATCAACTTACCTAAAACTATTGTTGACA
GAGCTAATAATTTATTTAAACAGGTACACGACGGTAAAAATCTAAAGGGAAGGGCGAACG
ACGCGATCGCTTCCGCGTGCCTCTATATAGCTTGCCGTCAAGAAGGTGTACCGCGTACCT
TCAAGGAGATATGTGCTGTCAGCAAAATCAGTAAAAAGGAGATCGGGCGATGTTTCAAAT
TGATCCTGAAAGCTCTCGAAACTTCTGTGGATCTCATCACGACCGCAGACTTCATGTCCA
GGTTCTGTTCGAACTTGGGTCTGCCTAATTCCGTTCAGCGCGCGGCGACGCACATCGCTA
GGAAAGCTGGGGAGTTGGACATAGTGTCTGGCAGAAGTCCTATCTCGGTGGCTGCCGCTG
CCATTTATATGGCTTCACAGGCGTCGGAGGACAAACGAAGCCAGAAAGAGATAGGCGATA
TAGCCGGTGTCGCTGACGTCACTATCCGTCAGTCGTACAAACTGATGTACCCGTTCGCTG
CGAAACTGTTCCCAGAAGACTTCAAATTCGTAACACCGATCGAGTTCCTGCCGCAG
(956 bp)

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