SearchView

Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

4501

A_SariASG_c17441_g1_i1

449bp

FPKM:2.52 TPM:2.44

4502

A_SariASG_c17442_g1_i1

265bp

FPKM:9.05 TPM:8.76

4503

A_SariASG_c17443_g1_i1

382bp

FPKM:3.25 TPM:3.15

4504

A_SariASG_c17448_g1_i1

681bp

uncharacterized_protein_LOC101741688_[Bombyx_mori]

FPKM:1.50 TPM:1.45

4505

A_SariASG_c17449_g1_i1

321bp

FPKM:1.66 TPM:1.61

4506

A_SariASG_c1744_g1_i1

205bp

FPKM:0.82 TPM:0.79

4507

A_SariASG_c17450_g1_i1

448bp

FPKM:1.42 TPM:1.37

4508

A_SariASG_c17451_g1_i1

285bp

hypothetical_protein_A7M46_17775_[Acinetobacter_baumannii]

FPKM:6.31 TPM:6.11

4509

A_SariASG_c17454_g1_i1

204bp

FPKM:1.66 TPM:1.61

4510

A_SariASG_c17455_g1_i1

443bp

FPKM:4.27 TPM:4.13

4511

A_SariASG_c17455_g1_i2

295bp

FPKM:0.13 TPM:0.12

4512

A_SariASG_c17455_g1_i3

360bp

FPKM:0.00 TPM:0.00

4513

A_SariASG_c17457_g1_i1

288bp

PREDICTED:_LOW_QUALITY_PROTEIN:_putative_U5_small_nuclear_ribonucleoprotein_200_kDa_helicase_[Amyelois_transitella]

GO:0000166	F	nucleotide binding
GO:0000381	P	regulation of alternative mRNA splicing, via spliceosome
GO:0000398	P	mRNA splicing, via spliceosome
GO:0003676	F	nucleic acid binding
GO:0003724	F	RNA helicase activity
GO:0004004	F	RNA helicase activity
GO:0004386	F	helicase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005681	C	spliceosomal complex
GO:0006397	P	mRNA processing
GO:0007067	P	mitotic cell cycle
GO:0007419	P	ventral cord development
GO:0008380	P	RNA splicing
GO:0016787	F	hydrolase activity
GO:0030532	C	small nuclear ribonucleoprotein complex
GO:0071011	C	precatalytic spliceosome
GO:0071013	C	catalytic step 2 spliceosome

FPKM:3.77 TPM:3.65

4514

A_SariASG_c17459_g1_i1

246bp

FPKM:2.45 TPM:2.38

4515

A_SariASG_c17460_g1_i1

243bp

FPKM:0.51 TPM:0.49

4516

A_SariASG_c17462_g1_i1

302bp

FPKM:3.11 TPM:3.01

4517

A_SariASG_c17463_g1_i1

206bp

FPKM:22.57 TPM:21.86

4518

A_SariASG_c17464_g1_i1

356bp

FPKM:1.37 TPM:1.33

4519

A_SariASG_c17465_g1_i1

518bp

PREDICTED:_sorting_nexin-17_isoform_X1_[Amyelois_transitella]

GO:0005737	C	cytoplasm
GO:0005768	C	endosome
GO:0005769	C	early endosome
GO:0005829	C	cytosol
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0007165	P	signal transduction
GO:0008289	F	lipid binding
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016023	C	cytoplasmic vesicle
GO:0030659	C	cytoplasmic vesicle membrane
GO:0031410	C	cytoplasmic vesicle
GO:0035091	F	phosphatidylinositol binding
GO:1990126	P	endocytic recycling

FPKM:2.68 TPM:2.59

4520

A_SariASG_c17468_g1_i1

220bp

FPKM:8.60 TPM:8.33

4521

A_SariASG_c17469_g1_i1

229bp

xanthine_dehydrogenase,_partial_[Bombyx_mori]

GO:0003824	F	catalytic activity
GO:0004854	F	xanthine dehydrogenase activity
GO:0004855	F	xanthine oxidase activity
GO:0005506	F	iron ion binding
GO:0005777	C	peroxisome
GO:0005829	C	cytosol
GO:0005875	C	microtubule associated complex
GO:0006144	P	purine nucleobase metabolic process
GO:0006206	P	pyrimidine nucleobase metabolic process
GO:0006525	P	arginine metabolic process
GO:0006568	P	tryptophan metabolic process
GO:0006650	P	glycerophospholipid metabolic process
GO:0008340	P	determination of adult lifespan
GO:0009055	F	electron transfer activity
GO:0009115	P	xanthine catabolic process
GO:0016491	F	oxidoreductase activity
GO:0016614	F	oxidoreductase activity, acting on CH-OH group of donors
GO:0016903	F	oxidoreductase activity, acting on the aldehyde or oxo group of donors
GO:0043546	F	molybdopterin cofactor binding
GO:0045471	P	response to ethanol
GO:0046872	F	metal ion binding
GO:0048072	P	compound eye pigmentation
GO:0050660	F	flavin adenine dinucleotide binding
GO:0051536	F	iron-sulfur cluster binding
GO:0051537	F	2 iron, 2 sulfur cluster binding
GO:0055114	P	obsolete oxidation-reduction process