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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4531 A_SariASG_c17484_g1_i1
334bp
FPKM:0.77 TPM:0.75
4532 A_SariASG_c17485_g1_i1
209bp
FPKM:2.31 TPM:2.24
4533 A_SariASG_c17486_g1_i1
246bp
PREDICTED:_40S_ribosomal_protein_S28_[Nomascus_leucogenys]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006407 P rRNA export from nucleus
GO:0006412 P translation
GO:0008150 P biological_process
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
FPKM:1.96 TPM:1.90
4534 A_SariASG_c17487_g1_i1
247bp
FPKM:2.43 TPM:2.35
4535 A_SariASG_c17488_g1_i1
272bp
FPKM:0.39 TPM:0.38
4536 A_SariASG_c17489_g1_i1
337bp
FPKM:1.01 TPM:0.98
4537 A_SariASG_c1748_g1_i1
220bp
FPKM:1.98 TPM:1.92
4538 A_SariASG_c17490_g1_i1
366bp
FPKM:2.18 TPM:2.11
4539 A_SariASG_c17492_g1_i1
314bp
FPKM:2.88 TPM:2.79
4540 A_SariASG_c17493_g1_i1
292bp
FPKM:4.33 TPM:4.19
4541 A_SariASG_c17497_g1_i1
285bp
hypothetical_protein_RR46_03792_[Papilio_xuthus]
FPKM:1.75 TPM:1.70
4542 A_SariASG_c17498_g1_i1
389bp
FPKM:5.71 TPM:5.53
4543 A_SariASG_c17499_g1_i1
294bp
FPKM:1.97 TPM:1.91
4544 A_SariASG_c17503_g1_i1
372bp
FPKM:2.33 TPM:2.26
4545 A_SariASG_c17504_g1_i1
1803bp
thioredoxin_reductase_1,_mitochondrial_isoform_X5_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0004362 F glutathione-disulfide reductase (NADPH) activity
GO:0004791 F thioredoxin-disulfide reductase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006974 P cellular response to DNA damage stimulus
GO:0008340 P determination of adult lifespan
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0016668 F oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0042803 F protein homodimerization activity
GO:0045454 P cell redox homeostasis
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:160.02 TPM:154.96
4546 A_SariASG_c17505_g1_i1
212bp
FPKM:7.38 TPM:7.14
4547 A_SariASG_c17506_g1_i1
333bp
FPKM:3.10 TPM:3.00
4548 A_SariASG_c17507_g1_i1
252bp
hypothetical_protein_TSUD_280790_[Trifolium_subterraneum]
FPKM:1.39 TPM:1.34
4549 A_SariASG_c1750_g1_i1
209bp
FPKM:1.54 TPM:1.49
4550 A_SariASG_c17511_g1_i1
535bp
FPKM:3.54 TPM:3.42
4551 A_SariASG_c17514_g1_i1
453bp
FPKM:2.17 TPM:2.10
4552 A_SariASG_c17515_g1_i1
352bp
FPKM:2.57 TPM:2.49
4553 A_SariASG_c17516_g1_i1
225bp
FPKM:3.72 TPM:3.61
4554 A_SariASG_c17519_g1_i1
259bp
FPKM:3.47 TPM:3.36
4555 A_SariASG_c1751_g1_i1
347bp
FPKM:4.07 TPM:3.94
4556 A_SariASG_c17520_g1_i1
298bp
FPKM:2.88 TPM:2.79
4557 A_SariASG_c17522_g1_i1
498bp
FPKM:1.89 TPM:1.83
4558 A_SariASG_c17523_g1_i1
496bp
FPKM:2.04 TPM:1.97
4559 A_SariASG_c17524_g1_i1
222bp
reverse_transcriptase_-_silkworm_transposon_Pao
FPKM:3.87 TPM:3.75
4560 A_SariASG_c17526_g1_i1
249bp
FPKM:1.91 TPM:1.85
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