SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/68433
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4471 A_SariASG_c17400_g1_i1
222bp
FPKM:2.58 TPM:2.50
4472 A_SariASG_c17402_g1_i1
240bp
putative_reverse_transcriptase_[Operophtera_brumata]
FPKM:3.14 TPM:3.04
4473 A_SariASG_c17403_g1_i1
563bp
hypothetical_protein_RR46_08518_[Papilio_xuthus]
FPKM:1.36 TPM:1.32
4474 A_SariASG_c17403_g1_i2
389bp
PREDICTED:_uncharacterized_protein_LOC106120014_[Papilio_xuthus]
FPKM:1.38 TPM:1.33
4475 A_SariASG_c17405_g1_i1
235bp
proton-coupled_folate_transporter_isoform_X1_[Bombyx_mori]
FPKM:1.10 TPM:1.07
4476 A_SariASG_c17408_g1_i1
261bp
PREDICTED:_uncharacterized_protein_LOC103572275_[Microplitis_demolitor]
FPKM:2.56 TPM:2.47
4477 A_SariASG_c17410_g1_i1
476bp
FPKM:2.16 TPM:2.09
4478 A_SariASG_c17411_g1_i1
255bp
FPKM:0.90 TPM:0.87
4479 A_SariASG_c17415_g1_i1
243bp
putative_phosphatidate_phosphatase_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0005918 C septate junction
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007424 P open tracheal system development
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0009880 P embryonic pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019991 P septate junction assembly
GO:0035233 P germ cell repulsion
GO:0035234 P ectopic germ cell programmed cell death
GO:0042577 F lipid phosphatase activity
GO:0042803 F protein homodimerization activity
GO:0045177 C apical part of cell
GO:0045824 P negative regulation of innate immune response
GO:0046839 P phospholipid dephosphorylation
GO:0050829 P defense response to Gram-negative bacterium
FPKM:1.52 TPM:1.47
4480 A_SariASG_c17416_g1_i1
474bp
FPKM:2.03 TPM:1.97
4481 A_SariASG_c17417_g1_i1
205bp
FPKM:0.82 TPM:0.79
4482 A_SariASG_c17418_g1_i1
263bp
MULTISPECIES:_hypothetical_protein_[Pseudomonas]
FPKM:1.67 TPM:1.62
4483 A_SariASG_c17419_g1_i1
266bp
FPKM:1.59 TPM:1.54
4484 A_SariASG_c17419_g1_i2
246bp
FPKM:1.04 TPM:1.00
4485 A_SariASG_c1741_g1_i1
221bp
FPKM:0.65 TPM:0.63
4486 A_SariASG_c17420_g1_i1
279bp
FPKM:6.24 TPM:6.04
4487 A_SariASG_c17421_g1_i1
315bp
PREDICTED:_uncharacterized_protein_LOC106104438,_partial_[Papilio_polytes]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.87 TPM:4.71
4488 A_SariASG_c17423_g1_i1
241bp
FPKM:4.65 TPM:4.51
4489 A_SariASG_c17426_g1_i1
294bp
FPKM:0.99 TPM:0.95
4490 A_SariASG_c17427_g1_i1
235bp
FPKM:1.10 TPM:1.07
4491 A_SariASG_c17428_g1_i1
383bp
FPKM:1.42 TPM:1.37
4492 A_SariASG_c17429_g1_i1
334bp
FPKM:3.08 TPM:2.98
4493 A_SariASG_c1742_g1_i1
367bp
FPKM:1.52 TPM:1.47
4494 A_SariASG_c17430_g1_i1
504bp
FPKM:3.71 TPM:3.60
4495 A_SariASG_c17433_g1_i1
563bp
FPKM:16.70 TPM:16.17
4496 A_SariASG_c17434_g1_i1
208bp
FPKM:0.00 TPM:0.00
4497 A_SariASG_c17436_g1_i1
364bp
Glutamyl-tRNA(Gln)_amidotransferase_subunit_C,_mitochondrial_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
FPKM:4.44 TPM:4.30
4498 A_SariASG_c17436_g1_i2
556bp
PREDICTED:_glutamyl-tRNA(Gln)_amidotransferase_subunit_C,_mitochondrial_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
FPKM:12.81 TPM:12.40
4499 A_SariASG_c17437_g1_i1
415bp
hypothetical_protein_RR46_03808_[Papilio_xuthus]
FPKM:0.00 TPM:0.00
4500 A_SariASG_c17437_g1_i2
428bp
hypothetical_protein_RR46_03808_[Papilio_xuthus]
FPKM:2.37 TPM:2.29
previous next from show/68433

- SilkBase 1999-2023 -