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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
961 A_BomaMSG_c11074_g1_i2
426bp
FPKM:1.95 TPM:0.87
962 A_BomaMSG_c11075_g1_i1
379bp
FPKM:1.76 TPM:0.79
963 A_BomaMSG_c11075_g2_i1
215bp
FPKM:13.96 TPM:6.24
964 A_BomaMSG_c11077_g1_i1
369bp
FPKM:8.29 TPM:3.70
965 A_BomaMSG_c11078_g1_i1
398bp
uncharacterized_protein_LOC101735793_isoform_X1_[Bombyx_mori]
FPKM:4.07 TPM:1.82
966 A_BomaMSG_c11079_g1_i1
359bp
FPKM:7.40 TPM:3.31
967 A_BomaMSG_c11082_g1_i1
440bp
FPKM:4.41 TPM:1.97
968 A_BomaMSG_c11083_g1_i1
217bp
uncharacterized_protein_LOC101741879_isoform_X2_[Bombyx_mori]
FPKM:7.76 TPM:3.47
969 A_BomaMSG_c11084_g1_i1
205bp
FPKM:4.62 TPM:2.06
970 A_BomaMSG_c11085_g1_i1
207bp
FPKM:3.36 TPM:1.50
971 A_BomaMSG_c11086_g1_i1
455bp
cadherin-86C_[Bombyx_mori]
FPKM:1.54 TPM:0.69
972 A_BomaMSG_c11087_g1_i1
344bp
FPKM:1.73 TPM:0.77
973 A_BomaMSG_c11090_g1_i1
275bp
FPKM:1.61 TPM:0.72
974 A_BomaMSG_c11096_g1_i1
205bp
PREDICTED:_homeotic_protein_female_sterile-like_isoform_X7_[Copidosoma_floridanum]
GO:0003677 F DNA binding
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:4.62 TPM:2.06
975 A_BomaMSG_c11097_g1_i1
206bp
zinc_finger_protein_235-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001701 P in utero embryonic development
GO:0001763 P morphogenesis of a branching structure
GO:0001892 P embryonic placenta development
GO:0001893 P maternal placenta development
GO:0003170 P heart valve development
GO:0003279 P cardiac septum development
GO:0003281 P ventricular septum development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0008168 F methyltransferase activity
GO:0009791 P post-embryonic development
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0016740 F transferase activity
GO:0030889 P negative regulation of B cell proliferation
GO:0031665 P negative regulation of lipopolysaccharide-mediated signaling pathway
GO:0032259 P methylation
GO:0035904 P aorta development
GO:0042127 P regulation of cell population proliferation
GO:0042462 P eye photoreceptor cell development
GO:0042826 F histone deacetylase binding
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045579 P positive regulation of B cell differentiation
GO:0046872 F metal ion binding
GO:0048844 P artery morphogenesis
GO:0048869 P cellular developmental process
GO:0060576 P intestinal epithelial cell development
GO:0060707 P trophoblast giant cell differentiation
GO:0060976 P coronary vasculature development
GO:1990654 P sebum secreting cell proliferation
FPKM:3.41 TPM:1.52
976 A_BomaMSG_c11099_g1_i1
214bp
DNA_repair_protein_complementing_XP-A_cells_homolog_[Bombyx_mori]
FPKM:6.07 TPM:2.71
977 A_BomaMSG_c1109_g1_i1
255bp
FPKM:4.45 TPM:1.99
978 A_BomaMSG_c110_g1_i1
251bp
FPKM:5.94 TPM:2.65
979 A_BomaMSG_c11104_g1_i1
238bp
leucine-rich_repeat-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005912 C adherens junction
GO:0007163 P establishment or maintenance of cell polarity
GO:0015031 P protein transport
FPKM:1.51 TPM:0.67
980 A_BomaMSG_c11104_g1_i2
284bp
leucine-rich_repeat-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005912 C adherens junction
GO:0007163 P establishment or maintenance of cell polarity
GO:0015031 P protein transport
FPKM:0.00 TPM:0.00
981 A_BomaMSG_c11105_g1_i1
218bp
FPKM:2.87 TPM:1.28
982 A_BomaMSG_c11108_g1_i1
224bp
FPKM:4.43 TPM:1.98
983 A_BomaMSG_c11109_g1_i1
225bp
FPKM:0.87 TPM:0.39
984 A_BomaMSG_c1110_g1_i1
471bp
putative_phosphatidate_phosphatase_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0005918 C septate junction
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007424 P open tracheal system development
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0009880 P embryonic pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019991 P septate junction assembly
GO:0035233 P germ cell repulsion
GO:0035234 P ectopic germ cell programmed cell death
GO:0042577 F lipid phosphatase activity
GO:0042803 F protein homodimerization activity
GO:0045177 C apical part of cell
GO:0045824 P negative regulation of innate immune response
GO:0046839 P phospholipid dephosphorylation
GO:0050829 P defense response to Gram-negative bacterium
FPKM:3.35 TPM:1.50
985 A_BomaMSG_c11111_g1_i1
1201bp
guanine_nucleotide_exchange_factor_subunit_Rich_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0032483 P regulation of Rab protein signal transduction
GO:0034066 C Ric1-Rgp1 guanyl-nucleotide exchange factor complex
GO:0035418 P protein localization to synapse
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0045467 P R7 cell development
GO:0050808 P synapse organization
GO:0060078 P regulation of postsynaptic membrane potential
GO:1903363 P negative regulation of cellular protein catabolic process
FPKM:2.69 TPM:1.20
986 A_BomaMSG_c11112_g1_i1
327bp
FPKM:3.04 TPM:1.36
987 A_BomaMSG_c11113_g1_i1
408bp
probable_Rho_GTPase-activating_protein_CG5521_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
FPKM:3.13 TPM:1.40
988 A_BomaMSG_c11114_g1_i1
305bp
FPKM:9.53 TPM:4.26
989 A_BomaMSG_c11115_g1_i1
521bp
uncharacterized_protein_LOC101743785_[Bombyx_mori]
FPKM:2.46 TPM:1.10
990 A_BomaMSG_c11115_g1_i2
593bp
uncharacterized_protein_LOC101743785_[Bombyx_mori]
FPKM:1.74 TPM:0.78
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