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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
901 A_BomaMSG_c11003_g1_i2
242bp
FPKM:0.00 TPM:0.00
902 A_BomaMSG_c11005_g1_i1
247bp
FPKM:3.43 TPM:1.53
903 A_BomaMSG_c11006_g1_i1
322bp
uncharacterized_protein_LOC101736419_[Bombyx_mori]
FPKM:3.51 TPM:1.57
904 A_BomaMSG_c11007_g1_i1
406bp
FPKM:5.78 TPM:2.58
905 A_BomaMSG_c11007_g1_i2
279bp
FPKM:0.00 TPM:0.00
906 A_BomaMSG_c11008_g1_i1
212bp
FPKM:1.04 TPM:0.46
907 A_BomaMSG_c1100_g1_i1
394bp
ATP-dependent_helicase_[Bombyx_mori]
FPKM:1.38 TPM:0.62
908 A_BomaMSG_c11010_g1_i1
312bp
uncharacterized_protein_LOC101736994_[Bombyx_mori]
FPKM:0.83 TPM:0.37
909 A_BomaMSG_c11012_g1_i1
279bp
protein_timeless_homolog_isoform_X2_[Bombyx_mori]
FPKM:2.60 TPM:1.16
910 A_BomaMSG_c11013_g1_i1
285bp
FPKM:9.93 TPM:4.44
911 A_BomaMSG_c11014_g1_i1
240bp
FPKM:0.00 TPM:0.00
912 A_BomaMSG_c11015_g1_i1
202bp
sterol_regulatory_element-binding_protein_cleavage-activating_protein_[Bombyx_mori]
FPKM:2.42 TPM:1.08
913 A_BomaMSG_c11015_g2_i1
333bp
sterol_regulatory_element-binding_protein_cleavage-activating_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0032933 P SREBP signaling pathway
FPKM:1.10 TPM:0.49
914 A_BomaMSG_c11018_g1_i1
612bp
uncharacterized_protein_LOC101746425,_partial_[Bombyx_mori]
FPKM:1.60 TPM:0.72
915 A_BomaMSG_c11019_g1_i1
472bp
FPKM:3.76 TPM:1.68
916 A_BomaMSG_c1101_g1_i1
294bp
palmitoyltransferase_app_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016409 F palmitoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
FPKM:1.86 TPM:0.83
917 A_BomaMSG_c11023_g1_i1
248bp
FPKM:4.75 TPM:2.12
918 A_BomaMSG_c11024_g1_i1
459bp
FPKM:1.31 TPM:0.58
919 A_BomaMSG_c11028_g1_i1
512bp
serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
FPKM:7.94 TPM:3.55
920 A_BomaMSG_c11029_g1_i1
594bp
FPKM:4.40 TPM:1.96
921 A_BomaMSG_c1102_g1_i1
370bp
glutamine_synthetase_2_cytoplasmic_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004351 F glutamate decarboxylase activity
GO:0004356 F glutamate-ammonia ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006542 P glutamine biosynthetic process
GO:0006807 P nitrogen compound metabolic process
GO:0016829 F lyase activity
GO:0016874 F ligase activity
FPKM:5.81 TPM:2.59
922 A_BomaMSG_c11031_g1_i1
1536bp
survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:0.54 TPM:0.24
923 A_BomaMSG_c11031_g1_i2
1671bp
survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:2.26 TPM:1.01
924 A_BomaMSG_c11032_g1_i1
642bp
3-ketoacyl-CoA_thiolase,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006695 P cholesterol biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1901029 P negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
GO:1902109 P negative regulation of mitochondrial membrane permeability involved in apoptotic process
FPKM:5.47 TPM:2.45
925 A_BomaMSG_c11034_g1_i1
638bp
PREDICTED:_PAX-interacting_protein_1_isoform_X2_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
FPKM:4.69 TPM:2.10
926 A_BomaMSG_c11035_g1_i1
849bp
alpha-crystallin_B_chain_[Bombyx_mori]
GO:0006497 P protein lipidation
GO:0007275 P multicellular organism development
GO:0010506 P regulation of autophagy
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
FPKM:325.88 TPM:145.63
927 A_BomaMSG_c11037_g1_i1
841bp
hypothetical_protein_ALO86_101160_[Pseudomonas_syringae_pv._berberidis]
FPKM:4031.51 TPM:1801.57
928 A_BomaMSG_c11037_g2_i1
472bp
Uncharacterized_protein_BN1183_CJ_02000_[Pantoea_ananatis]
FPKM:2.09 TPM:0.93
929 A_BomaMSG_c11038_g1_i1
1846bp
Hsc70/Hsp90-organizing_protein_HOP_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:24.89 TPM:11.12
930 A_BomaMSG_c11039_g1_i1
463bp
FPKM:4.08 TPM:1.83
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