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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
481 A_BomaMSG_c10560_g1_i2
312bp
FPKM:3.73 TPM:1.67
482 A_BomaMSG_c10561_g1_i1
463bp
proton-coupled_amino_acid_transporter-like_protein_pathetic_isoform_X2_[Bombyx_mori]
GO:0005280 F amino acid:proton symporter activity
GO:0005302 F L-tyrosine transmembrane transporter activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015078 F proton transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015187 F glycine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015804 P neutral amino acid transport
GO:0015808 P L-alanine transport
GO:0015816 P glycine transport
GO:0015824 P proline transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:1902600 P proton transmembrane transport
FPKM:3.44 TPM:1.54
483 A_BomaMSG_c10562_g1_i1
233bp
FPKM:1.59 TPM:0.71
484 A_BomaMSG_c10562_g1_i2
289bp
FPKM:0.48 TPM:0.22
485 A_BomaMSG_c10563_g1_i1
1487bp
FPKM:5.59 TPM:2.50
486 A_BomaMSG_c10565_g1_i1
228bp
FPKM:2.53 TPM:1.13
487 A_BomaMSG_c10566_g1_i1
349bp
FPKM:3.04 TPM:1.36
488 A_BomaMSG_c10567_g1_i1
267bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:7.43 TPM:3.32
489 A_BomaMSG_c10568_g1_i1
1014bp
protein_Gawky_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 C P-body
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0031047 P gene silencing by RNA
GO:0032880 P regulation of protein localization
GO:0035195 P gene silencing by miRNA
GO:0045475 P locomotor rhythm
FPKM:3.48 TPM:1.55
490 A_BomaMSG_c10568_g1_i2
415bp
protein_Gawky_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 C P-body
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0031047 P gene silencing by RNA
GO:0032880 P regulation of protein localization
GO:0035195 P gene silencing by miRNA
GO:0045475 P locomotor rhythm
FPKM:2.13 TPM:0.95
491 A_BomaMSG_c10569_g1_i1
292bp
protein_lines_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007367 P segment polarity determination
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0008293 P torso signaling pathway
GO:0008544 P epidermis development
GO:0009880 P embryonic pattern specification
GO:0009946 P proximal/distal axis specification
GO:0016055 P Wnt signaling pathway
GO:0035220 P wing disc development
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048617 P embryonic foregut morphogenesis
GO:0048619 P embryonic hindgut morphogenesis
FPKM:5.67 TPM:2.53
492 A_BomaMSG_c1056_g1_i1
284bp
FPKM:6.00 TPM:2.68
493 A_BomaMSG_c10570_g1_i1
751bp
FPKM:3.47 TPM:1.55
494 A_BomaMSG_c10571_g1_i1
540bp
probable_cysteine--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:3.11 TPM:1.39
495 A_BomaMSG_c10572_g1_i1
370bp
FPKM:3.67 TPM:1.64
496 A_BomaMSG_c10573_g1_i1
780bp
uncharacterized_protein_LOC105842437_[Bombyx_mori]
FPKM:3.31 TPM:1.48
497 A_BomaMSG_c10574_g1_i1
326bp
putative_DNA-binding_protein_Ewg,_partial_[Operophtera_brumata]
FPKM:6.87 TPM:3.07
498 A_BomaMSG_c10575_g1_i1
714bp
FPKM:14.56 TPM:6.51
499 A_BomaMSG_c10575_g2_i1
201bp
FPKM:3.69 TPM:1.65
500 A_BomaMSG_c10576_g1_i1
457bp
FPKM:2.08 TPM:0.93
501 A_BomaMSG_c10577_g1_i1
934bp
FPKM:2.43 TPM:1.08
502 A_BomaMSG_c10577_g1_i2
1264bp
FPKM:16.85 TPM:7.53
503 A_BomaMSG_c10578_g1_i1
207bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
FPKM:1.12 TPM:0.50
504 A_BomaMSG_c10578_g2_i1
477bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0046983 F protein dimerization activity
FPKM:2.47 TPM:1.10
505 A_BomaMSG_c10579_g1_i1
737bp
zinc_finger_protein_567_[Bombyx_mori]
FPKM:2.18 TPM:0.97
506 A_BomaMSG_c1057_g1_i1
771bp
survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:2.28 TPM:1.02
507 A_BomaMSG_c10580_g1_i1
240bp
WD40_repeat-containing_protein_SMU1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:4.90 TPM:2.19
508 A_BomaMSG_c10580_g1_i2
311bp
PREDICTED:_LOW_QUALITY_PROTEIN:_WD40_repeat-containing_protein_SMU1_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:5.15 TPM:2.30
509 A_BomaMSG_c10581_g1_i1
1053bp
GTP-binding_protein_128up_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
FPKM:4.62 TPM:2.07
510 A_BomaMSG_c10582_g1_i1
489bp
uncharacterized_protein_LOC101745053_[Bombyx_mori]
FPKM:16.28 TPM:7.27
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