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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3811 A_BomaMSG_c14095_g1_i1
493bp
putative_receptor_tyrosine_phosphatase_type_r2a_[Danaus_plexippus_plexippus]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0008360 P regulation of cell shape
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031290 P retinal ganglion cell axon guidance
GO:0032093 F SAM domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045467 P R7 cell development
GO:0048477 P oogenesis
GO:0048675 P axon extension
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0051124 P synaptic assembly at neuromuscular junction
GO:1903386 P negative regulation of homophilic cell adhesion
FPKM:2.55 TPM:1.14
3812 A_BomaMSG_c14096_g1_i1
270bp
FPKM:1.67 TPM:0.75
3813 A_BomaMSG_c14098_g1_i1
235bp
FPKM:1.56 TPM:0.70
3814 A_BomaMSG_c14099_g1_i1
244bp
FPKM:1.41 TPM:0.63
3815 A_BomaMSG_c1409_g1_i1
219bp
glycerol-3-phosphate_acyltransferase_3_isoform_X3_[Bombyx_mori]
GO:0002071 P glandular epithelial cell maturation
GO:0004366 F glycerol-3-phosphate O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006637 P acyl-CoA metabolic process
GO:0006641 P triglyceride metabolic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0007595 P lactation
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0030879 P mammary gland development
GO:0040014 P regulation of multicellular organism growth
GO:0046339 P diacylglycerol metabolic process
FPKM:3.78 TPM:1.69
3816 A_BomaMSG_c14100_g1_i1
206bp
solute_carrier_family_22_member_15-like_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.27 TPM:1.02
3817 A_BomaMSG_c14101_g1_i1
325bp
FPKM:1.54 TPM:0.69
3818 A_BomaMSG_c14103_g1_i1
236bp
FPKM:2.31 TPM:1.03
3819 A_BomaMSG_c14104_g1_i1
251bp
reverse_transcriptase,_partial_[Bombyx_mori]
FPKM:8.49 TPM:3.80
3820 A_BomaMSG_c14105_g1_i1
637bp
uncharacterized_protein_LOC110385830_[Bombyx_mori]
FPKM:1.66 TPM:0.74
3821 A_BomaMSG_c14107_g1_i1
208bp
FPKM:4.41 TPM:1.97
3822 A_BomaMSG_c14108_g1_i1
312bp
pyridine_nucleotide-disulfide_oxidoreductase_domain-containing_protein_1_[Bombyx_mori]
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:4.56 TPM:2.04
3823 A_BomaMSG_c14109_g1_i1
269bp
FPKM:9.56 TPM:4.27
3824 A_BomaMSG_c1410_g1_i1
713bp
FPKM:3.83 TPM:1.71
3825 A_BomaMSG_c14110_g1_i1
525bp
phosphoinositide_3-kinase_regulatory_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005643 C nuclear pore
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006468 P protein phosphorylation
GO:0006623 P protein targeting to vacuole
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030242 P autophagy of peroxisome
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032465 P regulation of cytokinesis
GO:0032801 P receptor catabolic process
GO:0034162 P toll-like receptor 9 signaling pathway
GO:0034271 C phosphatidylinositol 3-kinase complex, class III, type I
GO:0034272 C phosphatidylinositol 3-kinase complex, class III, type II
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042149 P cellular response to glucose starvation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045324 P late endosome to vacuole transport
GO:0071561 C nucleus-vacuole junction
FPKM:1.44 TPM:0.64
3826 A_BomaMSG_c14111_g1_i1
288bp
FPKM:4.86 TPM:2.17
3827 A_BomaMSG_c14112_g1_i1
585bp
metaxin-1_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.71 TPM:1.66
3828 A_BomaMSG_c14114_g1_i1
626bp
alpha-protein_kinase_1_[Bombyx_mori]
FPKM:2.26 TPM:1.01
3829 A_BomaMSG_c14115_g1_i1
364bp
uncharacterized_protein_LOC101743259_[Bombyx_mori]
FPKM:2.51 TPM:1.12
3830 A_BomaMSG_c14116_g1_i1
391bp
FPKM:7.81 TPM:3.49
3831 A_BomaMSG_c14117_g1_i1
273bp
FPKM:10.35 TPM:4.63
3832 A_BomaMSG_c14118_g1_i1
345bp
THO_complex_subunit_7_homolog_isoform_X1_[Bombyx_mori]
GO:0000445 C THO complex part of transcription export complex
GO:0000446 C nucleoplasmic THO complex
GO:0000781 C chromosome, telomeric region
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0016607 C nuclear speck
FPKM:5.86 TPM:2.62
3833 A_BomaMSG_c14119_g1_i1
246bp
FPKM:0.69 TPM:0.31
3834 A_BomaMSG_c1411_g1_i1
557bp
FPKM:2.32 TPM:1.03
3835 A_BomaMSG_c14120_g1_i1
296bp
FPKM:5.97 TPM:2.67
3836 A_BomaMSG_c14121_g1_i1
316bp
uncharacterized_protein_LOC101736712_[Bombyx_mori]
FPKM:8.09 TPM:3.62
3837 A_BomaMSG_c14122_g1_i1
490bp
mitochondrial_import_inner_membrane_translocase_subunit_TIM44_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030150 P protein import into mitochondrial matrix
GO:0051087 F chaperone binding
FPKM:5.54 TPM:2.48
3838 A_BomaMSG_c14123_g1_i1
348bp
uncharacterized_protein_LOC101739529_[Bombyx_mori]
FPKM:2.38 TPM:1.06
3839 A_BomaMSG_c14124_g1_i1
273bp
FPKM:1.63 TPM:0.73
3840 A_BomaMSG_c14125_g1_i1
337bp
FPKM:4.31 TPM:1.93
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