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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3781 A_BomaMSG_c14060_g1_i1
456bp
FPKM:0.88 TPM:0.39
3782 A_BomaMSG_c14061_g1_i1
240bp
protein_unc-80_homolog_[Bombyx_mori]
GO:0005261 F cation channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034703 C cation channel complex
GO:0045475 P locomotor rhythm
GO:0055080 P cation homeostasis
GO:0098655 P cation transmembrane transport
FPKM:2.95 TPM:1.32
3783 A_BomaMSG_c14062_g1_i1
437bp
autophagy_related_protein_Atg4-like_protein,_partial_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
FPKM:3.28 TPM:1.47
3784 A_BomaMSG_c14064_g1_i1
567bp
proton-coupled_amino_acid_transporter-like_protein_pathetic_isoform_X2_[Bombyx_mori]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0055085 P transmembrane transport
FPKM:1.61 TPM:0.72
3785 A_BomaMSG_c14064_g2_i1
261bp
proton-coupled_amino_acid_transporter-like_protein_pathetic_isoform_X1_[Bombyx_mori]
FPKM:1.81 TPM:0.81
3786 A_BomaMSG_c14066_g1_i1
245bp
DNA_topoisomerase_2-binding_protein_1_[Bombyx_mori]
FPKM:2.80 TPM:1.25
3787 A_BomaMSG_c14067_g1_i1
368bp
FPKM:4.01 TPM:1.79
3788 A_BomaMSG_c14068_g1_i1
276bp
FPKM:6.91 TPM:3.09
3789 A_BomaMSG_c14069_g1_i1
387bp
WD_repeat-containing_protein_35,_partial_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0035091 F phosphatidylinositol binding
GO:0035721 P intraciliary retrograde transport
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0061512 P protein localization to cilium
FPKM:2.84 TPM:1.27
3790 A_BomaMSG_c14070_g1_i1
277bp
FPKM:3.69 TPM:1.65
3791 A_BomaMSG_c14071_g1_i1
220bp
FPKM:3.68 TPM:1.64
3792 A_BomaMSG_c14071_g1_i2
201bp
FPKM:7.44 TPM:3.32
3793 A_BomaMSG_c14072_g1_i1
288bp
uncharacterized_protein_LOC101739231_[Bombyx_mori]
FPKM:6.80 TPM:3.04
3794 A_BomaMSG_c14073_g1_i1
506bp
testis-expressed_protein_10_[Bombyx_mori]
FPKM:2.27 TPM:1.01
3795 A_BomaMSG_c14073_g1_i2
353bp
testis-expressed_protein_10_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3796 A_BomaMSG_c14075_g1_i1
287bp
FPKM:2.45 TPM:1.09
3797 A_BomaMSG_c14076_g1_i1
415bp
claspin-like_[Bombyx_mori]
FPKM:3.05 TPM:1.36
3798 A_BomaMSG_c14078_g1_i1
261bp
uncharacterized_protein_LOC101740483_[Bombyx_mori]
FPKM:6.02 TPM:2.69
3799 A_BomaMSG_c14079_g1_i1
338bp
FPKM:1.43 TPM:0.64
3800 A_BomaMSG_c1407_g1_i1
297bp
putative_zinc_finger_and_SCAN_domain-containing_protein_5D_[Bombyx_mori]
FPKM:1.83 TPM:0.82
3801 A_BomaMSG_c14082_g1_i1
264bp
FPKM:2.93 TPM:1.31
3802 A_BomaMSG_c14083_g1_i1
277bp
uncharacterized_protein_LOC101738586_[Bombyx_mori]
FPKM:16.35 TPM:7.31
3803 A_BomaMSG_c14084_g1_i1
364bp
FPKM:1.05 TPM:0.47
3804 A_BomaMSG_c14084_g1_i2
340bp
FPKM:1.29 TPM:0.58
3805 A_BomaMSG_c14085_g1_i1
204bp
FPKM:7.03 TPM:3.14
3806 A_BomaMSG_c14086_g1_i1
247bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3807 A_BomaMSG_c14086_g1_i2
353bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
FPKM:4.63 TPM:2.07
3808 A_BomaMSG_c14088_g1_i1
240bp
xanthine_dehydrogenase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004854 F xanthine dehydrogenase activity
GO:0004855 F xanthine oxidase activity
GO:0005506 F iron ion binding
GO:0005777 C peroxisome
GO:0009055 F electron transfer activity
GO:0009115 P xanthine catabolic process
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0043546 F molybdopterin cofactor binding
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.00 TPM:0.00
3809 A_BomaMSG_c14093_g1_i1
402bp
phosphatidylinositol_4-kinase_alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030660 C Golgi-associated vesicle membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0070062 C extracellular exosome
FPKM:6.94 TPM:3.10
3810 A_BomaMSG_c14094_g1_i1
341bp
FPKM:1.41 TPM:0.63
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