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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
361 A_BomaMSG_c10446_g1_i1
267bp
FPKM:14.29 TPM:6.39
362 A_BomaMSG_c10447_g1_i1
223bp
zinc_finger_protein_583_isoform_X2_[Bombyx_mori]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0009649 P entrainment of circadian clock
GO:0010114 P response to red light
GO:0035271 P ring gland development
GO:0042051 P compound eye photoreceptor development
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0060086 P circadian temperature homeostasis
FPKM:6.28 TPM:2.81
363 A_BomaMSG_c10448_g1_i1
380bp
FPKM:1.91 TPM:0.85
364 A_BomaMSG_c10448_g1_i2
410bp
FPKM:1.67 TPM:0.75
365 A_BomaMSG_c10449_g1_i1
514bp
anoctamin-4_isoform_X3_[Bombyx_mori]
GO:0005229 F intracellular calcium activated chloride channel activity
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031513 C non-motile cilium
GO:0034707 C chloride channel complex
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:1902476 P chloride transmembrane transport
FPKM:2.96 TPM:1.32
366 A_BomaMSG_c1044_g1_i1
471bp
mucin-5AC_isoform_X2_[Bombyx_mori]
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0010468 P regulation of gene expression
GO:0030914 C SAGA complex
GO:0043966 P histone H3 acetylation
GO:0070822 C Sin3-type complex
FPKM:2.93 TPM:1.31
367 A_BomaMSG_c10451_g1_i1
225bp
protein_wntless_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0030054 C cell junction
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0030285 C integral component of synaptic vesicle membrane
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031228 C intrinsic component of Golgi membrane
GO:0031302 C intrinsic component of endosome membrane
GO:0031594 C neuromuscular junction
GO:0033157 P regulation of intracellular protein transport
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050714 P positive regulation of protein secretion
FPKM:4.37 TPM:1.95
368 A_BomaMSG_c10452_g1_i1
214bp
FPKM:2.02 TPM:0.90
369 A_BomaMSG_c10453_g1_i1
269bp
unnamed_protein_product,_partial_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.69 TPM:0.75
370 A_BomaMSG_c10453_g2_i1
260bp
DNA,_W-Samurai_RAPD_marker_in_retrotranposable_element_(reverse_transcriptase),_strain_p50_[Operophtera_brumata]
FPKM:1.82 TPM:0.81
371 A_BomaMSG_c10455_g1_i1
434bp
death_related_ced-3/Nedd2-like_protein_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0097153 F cysteine-type endopeptidase activity involved in apoptotic process
FPKM:3.08 TPM:1.38
372 A_BomaMSG_c10456_g1_i1
503bp
UPF0183_protein_CG7083_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:4.19 TPM:1.87
373 A_BomaMSG_c10457_g1_i1
684bp
FPKM:3.28 TPM:1.46
374 A_BomaMSG_c10458_g1_i1
927bp
Mn_superoxide_dismutase_[Bombyx_mori]
GO:0000302 P response to reactive oxygen species
GO:0000303 P response to superoxide
GO:0001306 P age-dependent response to oxidative stress
GO:0001315 P age-dependent response to reactive oxygen species
GO:0001666 P response to hypoxia
GO:0001836 P release of cytochrome c from mitochondria
GO:0001889 P liver development
GO:0003032 P detection of oxygen
GO:0003069 P acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure
GO:0003677 F DNA binding
GO:0004784 F superoxide dismutase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006749 P glutathione metabolic process
GO:0006801 P superoxide metabolic process
GO:0006979 P response to oxidative stress
GO:0007005 P mitochondrion organization
GO:0007507 P heart development
GO:0007568 P aging
GO:0007626 P locomotory behavior
GO:0008217 P regulation of blood pressure
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0008631 P intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0008637 P apoptotic mitochondrial changes
GO:0009314 P response to radiation
GO:0009409 P response to cold
GO:0009791 P post-embryonic development
GO:0010042 P response to manganese ion
GO:0010043 P response to zinc ion
GO:0010269 P response to selenium ion
GO:0010332 P response to gamma radiation
GO:0014823 P response to activity
GO:0016491 F oxidoreductase activity
GO:0019430 P removal of superoxide radicals
GO:0019825 F oxygen binding
GO:0019899 F enzyme binding
GO:0022904 P respiratory electron transport chain
GO:0030097 P hemopoiesis
GO:0030145 F manganese ion binding
GO:0031667 P response to nutrient levels
GO:0032496 P response to lipopolysaccharide
GO:0033591 P response to L-ascorbic acid
GO:0034021 P response to silicon dioxide
GO:0035900 P response to isolation stress
GO:0035902 P response to immobilization stress
GO:0042311 P vasodilation
GO:0042493 P response to xenobiotic stimulus
GO:0042542 P response to hydrogen peroxide
GO:0042554 P superoxide anion generation
GO:0042645 C mitochondrial nucleoid
GO:0042743 P hydrogen peroxide metabolic process
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0043209 C myelin sheath
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0045599 P negative regulation of fat cell differentiation
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048666 P neuron development
GO:0048678 P response to axon injury
GO:0048773 P erythrophore differentiation
GO:0050665 P hydrogen peroxide biosynthetic process
GO:0050790 P regulation of catalytic activity
GO:0051260 P protein homooligomerization
GO:0051602 P response to electrical stimulus
GO:0051881 P regulation of mitochondrial membrane potential
GO:0055072 P iron ion homeostasis
GO:0055093 P response to hyperoxia
GO:0055114 P obsolete oxidation-reduction process
GO:0071000 P response to magnetism
GO:0071361 P cellular response to ethanol
FPKM:53.90 TPM:24.09
375 A_BomaMSG_c10459_g1_i1
299bp
FPKM:0.00 TPM:0.00
376 A_BomaMSG_c10459_g1_i2
776bp
FPKM:5.70 TPM:2.55
377 A_BomaMSG_c1045_g1_i1
335bp
putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0005351 F carbohydrate:proton symporter activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006820 P anion transport
GO:0006865 P amino acid transport
GO:0015136 F sialic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015538 F sialic acid:proton symporter activity
GO:0015739 P sialic acid transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
GO:1905039 P carboxylic acid transmembrane transport
FPKM:3.99 TPM:1.79
378 A_BomaMSG_c10460_g1_i1
637bp
FPKM:1.80 TPM:0.80
379 A_BomaMSG_c10461_g1_i1
387bp
FPKM:2.55 TPM:1.14
380 A_BomaMSG_c10464_g1_i1
797bp
probable_RNA_3'-terminal_phosphate_cyclase-like_protein_[Bombyx_mori]
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006396 P RNA processing
GO:0009267 P cellular response to starvation
GO:0042254 P ribosome biogenesis
FPKM:1.98 TPM:0.88
381 A_BomaMSG_c10465_g1_i1
279bp
alpha_N-terminal_protein_methyltransferase_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006480 P N-terminal protein amino acid methylation
GO:0008168 F methyltransferase activity
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018016 P N-terminal peptidyl-proline dimethylation
GO:0032259 P methylation
GO:0035568 P N-terminal peptidyl-proline methylation
GO:0042054 F histone methyltransferase activity
GO:0071885 F N-terminal protein N-methyltransferase activity
FPKM:2.60 TPM:1.16
382 A_BomaMSG_c10466_g1_i1
230bp
FPKM:3.29 TPM:1.47
383 A_BomaMSG_c10467_g1_i1
748bp
FPKM:2.70 TPM:1.21
384 A_BomaMSG_c10468_g1_i1
723bp
uncharacterized_protein_LOC101738974_[Bombyx_mori]
FPKM:3.76 TPM:1.68
385 A_BomaMSG_c10469_g1_i1
632bp
serine/threonine-protein_kinase_Tao_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0032874 P positive regulation of stress-activated MAPK cascade
GO:0046330 P positive regulation of JNK cascade
GO:0051301 P cell division
GO:0051493 P regulation of cytoskeleton organization
GO:0097194 P execution phase of apoptosis
FPKM:3.63 TPM:1.62
386 A_BomaMSG_c10470_g1_i1
233bp
FPKM:4.77 TPM:2.13
387 A_BomaMSG_c10471_g1_i1
217bp
uncharacterized_protein_LOC101742002_isoform_X1_[Bombyx_mori]
FPKM:4.92 TPM:2.20
388 A_BomaMSG_c10471_g1_i2
302bp
uncharacterized_protein_LOC101742002_isoform_X1_[Bombyx_mori]
FPKM:1.74 TPM:0.78
389 A_BomaMSG_c10472_g1_i1
963bp
proton-coupled_folate_transporter_isoform_X1_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:2.82 TPM:1.26
390 A_BomaMSG_c10473_g1_i1
494bp
protein_FAM91A1_[Helicoverpa_armigera]
FPKM:3.33 TPM:1.49
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