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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3601 A_BomaMSG_c13845_g1_i1
269bp
FPKM:3.37 TPM:1.51
3602 A_BomaMSG_c13846_g1_i1
325bp
FPKM:3.07 TPM:1.37
3603 A_BomaMSG_c13847_g1_i1
537bp
organic_cation_transporter_protein_[Bombyx_mori]
FPKM:2.61 TPM:1.17
3604 A_BomaMSG_c13849_g1_i1
394bp
reverse_transcriptase,_partial_[Lasius_niger]
FPKM:2.48 TPM:1.11
3605 A_BomaMSG_c1384_g1_i1
264bp
uncharacterized_protein_LOC105842098_[Bombyx_mori]
FPKM:3.52 TPM:1.57
3606 A_BomaMSG_c13850_g1_i1
272bp
FPKM:0.55 TPM:0.25
3607 A_BomaMSG_c13851_g1_i1
251bp
FPKM:0.00 TPM:0.00
3608 A_BomaMSG_c13851_g1_i2
253bp
FPKM:1.29 TPM:0.58
3609 A_BomaMSG_c13852_g1_i1
480bp
DID_protein_isoform_X1_[Bombyx_mori]
FPKM:5.71 TPM:2.55
3610 A_BomaMSG_c13852_g1_i2
493bp
DID_protein_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3611 A_BomaMSG_c13853_g1_i1
366bp
PREDICTED:_neurobeachin_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0007528 P neuromuscular junction development
GO:0007614 P short-term memory
GO:0008104 P protein localization
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0042462 P eye photoreceptor cell development
GO:0042675 P compound eye cone cell differentiation
GO:0043025 C neuronal cell body
GO:0043204 C perikaryon
GO:0051018 F protein kinase A binding
FPKM:1.87 TPM:0.83
3612 A_BomaMSG_c13853_g1_i2
340bp
PREDICTED:_neurobeachin_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0007528 P neuromuscular junction development
GO:0007614 P short-term memory
GO:0008104 P protein localization
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0042462 P eye photoreceptor cell development
GO:0042675 P compound eye cone cell differentiation
GO:0043025 C neuronal cell body
GO:0043204 C perikaryon
GO:0051018 F protein kinase A binding
FPKM:0.00 TPM:0.00
3613 A_BomaMSG_c13855_g1_i1
929bp
survivin-1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:2.34 TPM:1.04
3614 A_BomaMSG_c13856_g1_i1
592bp
FPKM:5.03 TPM:2.25
3615 A_BomaMSG_c13857_g1_i1
337bp
mental_retardation_GTPase_activating_protein_homolog_4_isoform_X3_[Bombyx_mori]
FPKM:2.16 TPM:0.96
3616 A_BomaMSG_c13858_g1_i1
485bp
protein_O-mannosyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0035269 P protein O-linked mannosylation
GO:0097502 P mannosylation
FPKM:1.41 TPM:0.63
3617 A_BomaMSG_c1385_g1_i1
430bp
E3_ubiquitin-protein_ligase_TRAIP-like_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0030521 P androgen receptor signaling pathway
GO:0031491 F nucleosome binding
GO:0032184 F SUMO polymer binding
GO:0033234 P negative regulation of protein sumoylation
GO:0033768 C SUMO-targeted ubiquitin ligase complex
GO:0042802 F identical protein binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046685 P response to arsenic-containing substance
GO:0046872 F metal ion binding
GO:0050681 F androgen receptor binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
GO:0090169 P regulation of spindle assembly
GO:0090234 P regulation of kinetochore assembly
FPKM:2.64 TPM:1.18
3618 A_BomaMSG_c13860_g1_i1
368bp
FPKM:6.48 TPM:2.89
3619 A_BomaMSG_c13861_g1_i1
225bp
FPKM:3.50 TPM:1.56
3620 A_BomaMSG_c13862_g1_i1
504bp
FPKM:4.37 TPM:1.95
3621 A_BomaMSG_c13863_g1_i1
307bp
hypothetical_protein_RR48_09367_[Papilio_machaon]
FPKM:2.57 TPM:1.15
3622 A_BomaMSG_c13864_g1_i1
336bp
microtubule-associated_protein_RP/EB_family_member_3_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0015630 C microtubule cytoskeleton
GO:0030981 C cortical microtubule cytoskeleton
GO:0031115 P negative regulation of microtubule polymerization
GO:0031253 C cell projection membrane
GO:0035371 C microtubule plus-end
GO:0035372 P protein localization to microtubule
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0051010 F microtubule plus-end binding
GO:0051301 P cell division
GO:1903033 P positive regulation of microtubule plus-end binding
FPKM:3.25 TPM:1.45
3623 A_BomaMSG_c13866_g1_i1
258bp
actin_cytoskeleton-regulatory_complex_protein_pan1,_partial_[Bombyx_mori]
FPKM:3.09 TPM:1.38
3624 A_BomaMSG_c13868_g1_i1
459bp
FPKM:2.61 TPM:1.17
3625 A_BomaMSG_c1386_g1_i1
294bp
FPKM:0.47 TPM:0.21
3626 A_BomaMSG_c13873_g1_i1
228bp
FPKM:0.00 TPM:0.00
3627 A_BomaMSG_c13873_g1_i2
349bp
FPKM:2.03 TPM:0.91
3628 A_BomaMSG_c13874_g1_i1
422bp
FPKM:1.98 TPM:0.88
3629 A_BomaMSG_c13875_g1_i1
276bp
FPKM:0.53 TPM:0.24
3630 A_BomaMSG_c13877_g1_i1
366bp
FPKM:4.98 TPM:2.23
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