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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3541 A_BomaMSG_c13781_g1_i1
357bp
protein-S-isoprenylcysteine_O-methyltransferase_[Bombyx_mori]
GO:0004671 F protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006481 P C-terminal protein methylation
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
FPKM:8.44 TPM:3.77
3542 A_BomaMSG_c13783_g1_i1
367bp
PREDICTED:_uncharacterized_protein_LOC106125333_[Papilio_xuthus]
FPKM:1.24 TPM:0.55
3543 A_BomaMSG_c13784_g1_i1
305bp
PREDICTED:_uncharacterized_protein_LOC107071404_[Polistes_dominula]
FPKM:3.46 TPM:1.55
3544 A_BomaMSG_c13786_g1_i1
209bp
FPKM:1.09 TPM:0.49
3545 A_BomaMSG_c13786_g1_i2
223bp
FPKM:0.00 TPM:0.00
3546 A_BomaMSG_c13787_g1_i1
452bp
GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
FPKM:2.00 TPM:0.90
3547 A_BomaMSG_c1378_g1_i1
390bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.40 TPM:0.63
3548 A_BomaMSG_c13790_g1_i1
522bp
hypothetical_protein_RR48_04042_[Papilio_machaon]
FPKM:2.71 TPM:1.21
3549 A_BomaMSG_c13791_g1_i1
448bp
FPKM:2.03 TPM:0.91
3550 A_BomaMSG_c13792_g1_i1
275bp
hypothetical_protein_[Acinetobacter_baumannii]
FPKM:4.82 TPM:2.15
3551 A_BomaMSG_c13794_g1_i1
507bp
defensin-like_protein_precursor_[Bombyx_mori]
FPKM:7.92 TPM:3.54
3552 A_BomaMSG_c13796_g1_i1
269bp
FPKM:1.69 TPM:0.75
3553 A_BomaMSG_c13797_g1_i1
525bp
mediator_of_RNA_polymerase_II_transcription_subunit_31_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:6.82 TPM:3.05
3554 A_BomaMSG_c13798_g1_i1
315bp
PREDICTED:_WW_domain-binding_protein_11-like_[Microplitis_demolitor]
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0045292 P mRNA cis splicing, via spliceosome
FPKM:4.88 TPM:2.18
3555 A_BomaMSG_c13799_g1_i1
302bp
FPKM:6.62 TPM:2.96
3556 A_BomaMSG_c1379_g1_i1
240bp
FPKM:4.42 TPM:1.98
3557 A_BomaMSG_c13800_g1_i1
284bp
FPKM:3.00 TPM:1.34
3558 A_BomaMSG_c13801_g1_i1
441bp
FPKM:3.18 TPM:1.42
3559 A_BomaMSG_c13802_g1_i1
411bp
FPKM:2.32 TPM:1.04
3560 A_BomaMSG_c13803_g1_i1
259bp
FPKM:3.68 TPM:1.64
3561 A_BomaMSG_c13805_g1_i1
472bp
FPKM:3.55 TPM:1.59
3562 A_BomaMSG_c13808_g1_i1
350bp
FPKM:1.01 TPM:0.45
3563 A_BomaMSG_c13809_g1_i1
415bp
FPKM:3.55 TPM:1.59
3564 A_BomaMSG_c1380_g1_i1
256bp
talin-1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
FPKM:3.78 TPM:1.69
3565 A_BomaMSG_c13810_g1_i1
483bp
FPKM:2.22 TPM:0.99
3566 A_BomaMSG_c13811_g1_i1
224bp
FPKM:5.31 TPM:2.37
3567 A_BomaMSG_c13812_g1_i1
306bp
hypothetical_protein_ALO55_04108_[Pseudomonas_savastanoi_pv._phaseolicola]
FPKM:2.58 TPM:1.15
3568 A_BomaMSG_c13813_g1_i1
362bp
FPKM:3.17 TPM:1.42
3569 A_BomaMSG_c13815_g1_i1
259bp
muskelin_isoform_X1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0007160 P cell-matrix adhesion
GO:0008360 P regulation of cell shape
GO:0031532 P actin cytoskeleton reorganization
GO:0042995 C cell projection
FPKM:1.23 TPM:0.55
3570 A_BomaMSG_c13815_g1_i2
311bp
muskelin_isoform_X1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0007160 P cell-matrix adhesion
GO:0008360 P regulation of cell shape
GO:0031532 P actin cytoskeleton reorganization
GO:0042995 C cell projection
FPKM:2.08 TPM:0.93
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