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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3511 A_BomaMSG_c13748_g1_i1
383bp
FPKM:2.89 TPM:1.29
3512 A_BomaMSG_c13749_g1_i1
410bp
FPKM:6.21 TPM:2.77
3513 A_BomaMSG_c1374_g1_i1
211bp
FPKM:2.11 TPM:0.94
3514 A_BomaMSG_c13750_g1_i1
384bp
cyclin-G-associated_kinase_isoform_X1_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007030 P Golgi organization
GO:0007049 P cell cycle
GO:0010977 P negative regulation of neuron projection development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0031982 C vesicle
GO:0043231 C intracellular membrane-bounded organelle
GO:0048471 C perinuclear region of cytoplasm
FPKM:3.45 TPM:1.54
3515 A_BomaMSG_c13751_g1_i1
296bp
FPKM:0.00 TPM:0.00
3516 A_BomaMSG_c13751_g1_i2
320bp
FPKM:1.58 TPM:0.71
3517 A_BomaMSG_c13752_g1_i1
472bp
sorting_nexin-15_[Bombyx_mori]
FPKM:1.88 TPM:0.84
3518 A_BomaMSG_c13752_g1_i2
331bp
sorting_nexin-15_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3519 A_BomaMSG_c13754_g1_i1
381bp
FPKM:4.95 TPM:2.21
3520 A_BomaMSG_c13756_g1_i1
207bp
probable_cation-transporting_ATPase_13A3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006457 P protein folding
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
FPKM:3.36 TPM:1.50
3521 A_BomaMSG_c13758_g1_i1
550bp
FPKM:3.03 TPM:1.35
3522 A_BomaMSG_c13759_g1_i1
279bp
FPKM:2.60 TPM:1.16
3523 A_BomaMSG_c13762_g1_i1
516bp
cytoplasmic_protein_NCK1_[Bombyx_mori]
GO:0000164 C protein phosphatase type 1 complex
GO:0004860 F protein kinase inhibitor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005802 C trans-Golgi network
GO:0005840 C ribosome
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006417 P regulation of translation
GO:0006469 P negative regulation of protein kinase activity
GO:0006930 P substrate-dependent cell migration, cell extension
GO:0007015 P actin filament organization
GO:0010976 P positive regulation of neuron projection development
GO:0012506 C vesicle membrane
GO:0016192 P vesicle-mediated transport
GO:0016477 P cell migration
GO:0019904 F protein domain specific binding
GO:0030032 P lamellipodium assembly
GO:0030334 P regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0030971 F receptor tyrosine kinase binding
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0036493 P positive regulation of translation in response to endoplasmic reticulum stress
GO:0042102 P positive regulation of T cell proliferation
GO:0042110 P T cell activation
GO:0043547 P positive regulation of GTPase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:0051707 P response to other organism
GO:0060548 P negative regulation of cell death
GO:0070262 P peptidyl-serine dephosphorylation
GO:0071074 F eukaryotic initiation factor eIF2 binding
GO:1902237 P positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:1903676 P positive regulation of cap-dependent translational initiation
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1903898 P negative regulation of PERK-mediated unfolded protein response
GO:1903912 P negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation
GO:1904030 P negative regulation of cyclin-dependent protein kinase activity
GO:1990441 P negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
FPKM:2.02 TPM:0.90
3524 A_BomaMSG_c13763_g1_i1
349bp
FPKM:5.74 TPM:2.57
3525 A_BomaMSG_c13763_g2_i1
297bp
FPKM:3.78 TPM:1.69
3526 A_BomaMSG_c13765_g1_i1
596bp
serine/threonine-protein_kinase_SIK2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0008286 P insulin receptor signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
FPKM:3.92 TPM:1.75
3527 A_BomaMSG_c13766_g1_i1
300bp
FPKM:10.74 TPM:4.80
3528 A_BomaMSG_c13767_g1_i1
527bp
multiple_epidermal_growth_factor-like_domains_protein_8_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0010468 P regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030326 P embryonic limb morphogenesis
GO:0030509 P BMP signaling pathway
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060971 P embryonic heart tube left/right pattern formation
GO:0060972 P left/right pattern formation
GO:0061371 P determination of heart left/right asymmetry
GO:0071907 P determination of digestive tract left/right asymmetry
GO:0097155 P fasciculation of sensory neuron axon
FPKM:3.21 TPM:1.44
3529 A_BomaMSG_c13768_g1_i1
312bp
zinc_finger_protein_14_isoform_X4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
FPKM:2.07 TPM:0.93
3530 A_BomaMSG_c1376_g1_i1
799bp
FPKM:3.42 TPM:1.53
3531 A_BomaMSG_c13771_g1_i1
317bp
FPKM:2.41 TPM:1.08
3532 A_BomaMSG_c13773_g1_i1
354bp
ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
FPKM:2.96 TPM:1.32
3533 A_BomaMSG_c13774_g1_i1
591bp
LIM_domain-containing_protein_jub_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3534 A_BomaMSG_c13774_g1_i2
798bp
LIM_domain-containing_protein_jub_[Bombyx_mori]
GO:0000242 C pericentriolar material
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007067 P mitotic cell cycle
GO:0008270 F zinc ion binding
GO:0030054 C cell junction
GO:0030707 P ovarian follicle cell development
GO:0035329 P hippo signaling
GO:0045177 C apical part of cell
GO:0045179 C apical cortex
GO:0045572 P positive regulation of imaginal disc growth
GO:0046622 P positive regulation of organ growth
GO:0046872 F metal ion binding
GO:0071539 P protein localization to centrosome
FPKM:3.84 TPM:1.72
3535 A_BomaMSG_c13775_g1_i1
230bp
FPKM:2.47 TPM:1.10
3536 A_BomaMSG_c13776_g1_i1
481bp
uncharacterized_protein_LOC101747197_[Bombyx_mori]
FPKM:3.05 TPM:1.36
3537 A_BomaMSG_c13777_g1_i1
260bp
iron-sulfur_cluster_co-chaperone_protein_HscB,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
GO:0051259 P protein complex oligomerization
FPKM:4.25 TPM:1.90
3538 A_BomaMSG_c13779_g1_i1
280bp
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase_[Bombyx_mori]
FPKM:6.18 TPM:2.76
3539 A_BomaMSG_c1377_g1_i1
312bp
FPKM:1.24 TPM:0.56
3540 A_BomaMSG_c13780_g1_i1
330bp
FPKM:4.48 TPM:2.00
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