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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3391 A_BomaMSG_c13626_g1_i1
399bp
FPKM:2.97 TPM:1.33
3392 A_BomaMSG_c13628_g1_i1
359bp
WASH_complex_subunit_4_isoform_X1_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0071203 C WASH complex
FPKM:4.50 TPM:2.01
3393 A_BomaMSG_c13628_g2_i1
223bp
WASH_complex_subunit_4_isoform_X1_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0071203 C WASH complex
FPKM:3.59 TPM:1.60
3394 A_BomaMSG_c13629_g1_i1
4347bp
vigilin_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008289 F lipid binding
GO:0034364 C high-density lipoprotein particle
GO:0044822 F RNA binding
FPKM:415.96 TPM:185.88
3395 A_BomaMSG_c1362_g1_i1
407bp
protein_arginine_methyltransferase_NDUFAF7_homolog,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0032981 P mitochondrial respiratory chain complex I assembly
FPKM:1.31 TPM:0.58
3396 A_BomaMSG_c13632_g1_i1
592bp
protein_melted_isoform_X4_[Bombyx_mori]
GO:0001708 P cell fate specification
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007422 P peripheral nervous system development
GO:0008152 P metabolic process
GO:0008286 P insulin receptor signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030730 P sequestering of triglyceride
GO:0035091 F phosphatidylinositol binding
GO:0045464 P R8 cell fate specification
GO:2001020 P regulation of response to DNA damage stimulus
FPKM:2.74 TPM:1.23
3397 A_BomaMSG_c13633_g1_i1
401bp
FPKM:8.31 TPM:3.71
3398 A_BomaMSG_c13634_g1_i1
415bp
FPKM:3.81 TPM:1.70
3399 A_BomaMSG_c13634_g2_i1
523bp
FPKM:5.41 TPM:2.42
3400 A_BomaMSG_c13635_g1_i1
255bp
FPKM:3.20 TPM:1.43
3401 A_BomaMSG_c13637_g1_i1
1089bp
FPKM:61.17 TPM:27.34
3402 A_BomaMSG_c13638_g1_i1
586bp
blastoderm-specific_protein_25D_[Helicoverpa_armigera]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0046872 F metal ion binding
FPKM:3.71 TPM:1.66
3403 A_BomaMSG_c13638_g1_i2
482bp
blastoderm-specific_protein_25D_[Helicoverpa_armigera]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3404 A_BomaMSG_c13639_g1_i1
540bp
FPKM:2.59 TPM:1.16
3405 A_BomaMSG_c1363_g1_i1
357bp
FPKM:9.09 TPM:4.06
3406 A_BomaMSG_c13640_g1_i1
218bp
twinkle_protein,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003678 F DNA helicase activity
GO:0003697 F single-stranded DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006264 P mitochondrial DNA replication
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042645 C mitochondrial nucleoid
GO:0043139 F 5'-3' DNA helicase activity
FPKM:3.83 TPM:1.71
3407 A_BomaMSG_c13641_g1_i1
409bp
PREDICTED:_B-box_type_zinc_finger_protein_ncl-1-like_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006909 P phagocytosis
GO:0007400 P neuroblast fate determination
GO:0007402 P ganglion mother cell fate determination
GO:0007405 P neuroblast proliferation
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007411 P axon guidance
GO:0007419 P ventral cord development
GO:0007420 P brain development
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0008356 P asymmetric cell division
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009303 P rRNA transcription
GO:0017148 P negative regulation of translation
GO:0022008 P neurogenesis
GO:0030182 P neuron differentiation
GO:0030371 F translation repressor activity
GO:0035282 P segmentation
GO:0043025 C neuronal cell body
GO:0045179 C apical cortex
GO:0045180 C basal cortex
GO:0045182 F translation regulator activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0050767 P regulation of neurogenesis
GO:0051726 P regulation of cell cycle
GO:0055060 P asymmetric neuroblast division resulting in ganglion mother cell formation
GO:1900242 P regulation of synaptic vesicle endocytosis
FPKM:3.64 TPM:1.62
3408 A_BomaMSG_c13642_g1_i1
526bp
threonine_aspartase_1_[Bombyx_mori]
GO:0004298 F threonine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0045893 P positive regulation of transcription, DNA-templated
FPKM:3.22 TPM:1.44
3409 A_BomaMSG_c13643_g1_i1
975bp
FPKM:2.69 TPM:1.20
3410 A_BomaMSG_c13644_g1_i1
304bp
probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X3_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
FPKM:3.05 TPM:1.36
3411 A_BomaMSG_c13645_g1_i1
242bp
FPKM:2.16 TPM:0.97
3412 A_BomaMSG_c13646_g1_i1
220bp
FPKM:1.86 TPM:0.83
3413 A_BomaMSG_c13646_g1_i2
212bp
FPKM:5.20 TPM:2.32
3414 A_BomaMSG_c13649_g1_i1
234bp
NADH_dehydrogenase_(ubiquinone)_complex_I,_assembly_factor_6_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0009058 P biosynthetic process
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
FPKM:3.93 TPM:1.76
3415 A_BomaMSG_c13650_g1_i1
329bp
glutathione_S-transferase_epsilon_5_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
FPKM:4.88 TPM:2.18
3416 A_BomaMSG_c13652_g1_i1
284bp
non-lysosomal_glucosylceramidase_isoform_X3_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:2.00 TPM:0.89
3417 A_BomaMSG_c13653_g1_i1
672bp
calpain-B_isoform_X6_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
FPKM:0.00 TPM:0.00
3418 A_BomaMSG_c13653_g1_i2
817bp
calpain-B_isoform_X3_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
FPKM:2.52 TPM:1.13
3419 A_BomaMSG_c13654_g1_i1
1359bp
polyphosphoinositide_phosphatase_isoform_X1_[Bombyx_mori]
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0007033 P vacuole organization
GO:0007626 P locomotory behavior
GO:0010008 C endosome membrane
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0031642 P negative regulation of myelination
GO:0032288 P myelin assembly
GO:0034593 F phosphatidylinositol bisphosphate phosphatase activity
GO:0042578 F phosphoric ester hydrolase activity
GO:0043473 P pigmentation
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0048666 P neuron development
GO:0055037 C recycling endosome
FPKM:2.62 TPM:1.17
3420 A_BomaMSG_c13655_g1_i1
445bp
peroxidase_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005576 C extracellular region
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:2.51 TPM:1.12
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