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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3301 A_BomaMSG_c13548_g1_i1
1887bp
uncharacterized_protein_LOC101735428_isoform_X1_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
FPKM:54.38 TPM:24.30
3302 A_BomaMSG_c13548_g1_i2
1693bp
uncharacterized_protein_LOC101735428_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
FPKM:83.81 TPM:37.45
3303 A_BomaMSG_c13549_g1_i1
334bp
zinc_finger_protein_320_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:3.29 TPM:1.47
3304 A_BomaMSG_c1354_g1_i1
369bp
cadherin-23_[Bombyx_mori]
FPKM:2.46 TPM:1.10
3305 A_BomaMSG_c13550_g1_i1
255bp
FPKM:4.45 TPM:1.99
3306 A_BomaMSG_c13551_g1_i1
224bp
FPKM:0.34 TPM:0.15
3307 A_BomaMSG_c13551_g1_i2
802bp
FPKM:1.92 TPM:0.86
3308 A_BomaMSG_c13552_g1_i1
443bp
FPKM:6.89 TPM:3.08
3309 A_BomaMSG_c13553_g1_i1
320bp
uncharacterized_protein_LOC110385446,_partial_[Bombyx_mori]
FPKM:0.79 TPM:0.35
3310 A_BomaMSG_c13554_g1_i1
334bp
sid-1-related_gene1_precursor_[Bombyx_mori]
FPKM:1.70 TPM:0.76
3311 A_BomaMSG_c13554_g1_i2
328bp
sid-1-related_gene1_precursor_[Bombyx_mori]
FPKM:0.88 TPM:0.39
3312 A_BomaMSG_c13555_g1_i1
282bp
FPKM:5.58 TPM:2.50
3313 A_BomaMSG_c13556_g1_i1
634bp
FPKM:2.23 TPM:0.99
3314 A_BomaMSG_c13558_g1_i1
788bp
guanylate_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004385 F guanylate kinase activity
GO:0005524 F ATP binding
GO:0006163 P purine nucleotide metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
FPKM:2.74 TPM:1.23
3315 A_BomaMSG_c13559_g1_i1
567bp
FPKM:4.04 TPM:1.80
3316 A_BomaMSG_c1355_g1_i1
325bp
FPKM:1.15 TPM:0.51
3317 A_BomaMSG_c13560_g1_i1
396bp
synaptic_vesicle_2-related_protein_isoform_X2_[Bombyx_mori]
FPKM:3.01 TPM:1.34
3318 A_BomaMSG_c13561_g1_i1
326bp
PREDICTED:_uncharacterized_protein_LOC105381193_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.20 TPM:1.88
3319 A_BomaMSG_c13562_g1_i1
904bp
cysteine-rich_venom_protein_ENH1_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:37.15 TPM:16.60
3320 A_BomaMSG_c13562_g1_i2
914bp
cysteine-rich_venom_protein_ENH1_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:0.00 TPM:0.00
3321 A_BomaMSG_c13563_g1_i1
365bp
FPKM:5.94 TPM:2.65
3322 A_BomaMSG_c13564_g1_i1
743bp
protein_transport_protein_Sec31A_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0031410 C cytoplasmic vesicle
FPKM:31.33 TPM:14.00
3323 A_BomaMSG_c13564_g1_i2
214bp
protein_transport_protein_Sec31A_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3324 A_BomaMSG_c13566_g1_i1
274bp
FPKM:2.16 TPM:0.97
3325 A_BomaMSG_c13567_g1_i1
204bp
FPKM:7.03 TPM:3.14
3326 A_BomaMSG_c13569_g1_i1
497bp
FPKM:1.85 TPM:0.83
3327 A_BomaMSG_c13569_g1_i2
218bp
FPKM:2.34 TPM:1.04
3328 A_BomaMSG_c1356_g1_i1
274bp
FPKM:4.32 TPM:1.93
3329 A_BomaMSG_c13570_g1_i1
307bp
FPKM:4.28 TPM:1.91
3330 A_BomaMSG_c13570_g2_i1
234bp
FPKM:0.00 TPM:0.00
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