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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

3241

A_BomaMSG_c13495_g1_i1

254bp

uncharacterized_protein_LOC101736678_[Bombyx_mori]

GO:0003014	P	renal system process
GO:0005215	F	transporter activity
GO:0005372	F	water transmembrane transporter activity
GO:0005887	C	integral component of plasma membrane
GO:0006810	P	transport
GO:0006833	P	water transport
GO:0009992	P	cellular water homeostasis
GO:0015250	F	water channel activity
GO:0015254	F	glycerol channel activity
GO:0015793	P	glycerol transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030104	P	water homeostasis
GO:0034220	P	ion transmembrane transport
GO:0046662	P	regulation of oviposition
GO:0055085	P	transmembrane transport

FPKM:3.84 TPM:1.72

3242

A_BomaMSG_c13495_g1_i2

286bp

uncharacterized_protein_LOC101736678_[Bombyx_mori]

GO:0003014	P	renal system process
GO:0005215	F	transporter activity
GO:0005372	F	water transmembrane transporter activity
GO:0005887	C	integral component of plasma membrane
GO:0006810	P	transport
GO:0006833	P	water transport
GO:0009992	P	cellular water homeostasis
GO:0015250	F	water channel activity
GO:0015254	F	glycerol channel activity
GO:0015793	P	glycerol transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030104	P	water homeostasis
GO:0034220	P	ion transmembrane transport
GO:0046662	P	regulation of oviposition
GO:0055085	P	transmembrane transport

FPKM:4.93 TPM:2.20

3243

A_BomaMSG_c13496_g1_i1

527bp

solute_carrier_family_12_member_4_isoform_X1_[Bombyx_mori]

FPKM:1.44 TPM:0.64

3244

A_BomaMSG_c13496_g1_i2

332bp

solute_carrier_family_12_member_4_isoform_X1_[Bombyx_mori]

FPKM:2.19 TPM:0.98

3245

A_BomaMSG_c13497_g1_i1

206bp

FPKM:0.00 TPM:0.00

3246

A_BomaMSG_c13497_g1_i2

313bp

protein-O-fucosyltransferase_1_[Bombyx_mori]

GO:0005112	F	Notch binding
GO:0005737	C	cytoplasm
GO:0005783	C	endoplasmic reticulum
GO:0005794	C	Golgi apparatus
GO:0005975	P	carbohydrate metabolic process
GO:0006004	P	fucose metabolic process
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006486	P	protein glycosylation
GO:0006493	P	protein O-linked glycosylation
GO:0006897	P	endocytosis
GO:0007219	P	Notch signaling pathway
GO:0007399	P	nervous system development
GO:0008417	F	fucosyltransferase activity
GO:0008593	P	regulation of Notch signaling pathway
GO:0009790	P	embryo development
GO:0016266	P	O-glycan processing
GO:0016337	P	cell-cell adhesion
GO:0016740	F	transferase activity
GO:0016757	F	glycosyltransferase activity
GO:0030163	P	protein catabolic process
GO:0031410	C	cytoplasmic vesicle
GO:0036065	P	fucosylation
GO:0036066	P	protein O-linked fucosylation
GO:0045746	P	negative regulation of Notch signaling pathway
GO:0045747	P	positive regulation of Notch signaling pathway
GO:0046331	P	lateral inhibition
GO:0046922	F	peptide-O-fucosyltransferase activity

FPKM:2.47 TPM:1.10

3247

A_BomaMSG_c13498_g1_i1

233bp

FPKM:9.55 TPM:4.27

3248

A_BomaMSG_c13499_g1_i1

318bp

ras-related_GTP_binding_protein_[Bombyx_mori]

GO:0000082	P	G1/S transition of mitotic cell cycle
GO:0000139	C	Golgi membrane
GO:0000166	F	nucleotide binding
GO:0003924	F	GTPase activity
GO:0005525	F	GTP binding
GO:0005575	C	cellular_component
GO:0005622	C	intracellular anatomical structure
GO:0005737	C	cytoplasm
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0005794	C	Golgi apparatus
GO:0005829	C	cytosol
GO:0005975	P	carbohydrate metabolic process
GO:0006629	P	lipid metabolic process
GO:0007165	P	signal transduction
GO:0007264	P	small GTPase mediated signal transduction
GO:0007411	P	axon guidance
GO:0007430	P	terminal branching, open tracheal system
GO:0007446	P	imaginal disc growth
GO:0010506	P	regulation of autophagy
GO:0010507	P	negative regulation of autophagy
GO:0012505	C	endomembrane system
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016049	P	cell growth
GO:0030307	P	positive regulation of cell growth
GO:0032008	P	positive regulation of TOR signaling
GO:0035264	P	multicellular organism growth
GO:0042254	P	ribosome biogenesis
GO:0042331	P	phototaxis
GO:0042594	P	response to starvation
GO:0045176	P	apical protein localization
GO:0045727	P	positive regulation of translation
GO:0045793	P	positive regulation of cell size
GO:0046872	F	metal ion binding
GO:0051124	P	synaptic assembly at neuromuscular junction
GO:0090070	P	positive regulation of ribosome biogenesis
GO:2000377	P	regulation of reactive oxygen species metabolic process

FPKM:2.80 TPM:1.25

3249

A_BomaMSG_c1349_g1_i1

215bp

FPKM:4.98 TPM:2.23

3250

A_BomaMSG_c134_g1_i1

277bp

FPKM:2.11 TPM:0.94

3251

A_BomaMSG_c13500_g1_i1

518bp

uncharacterized_protein_LOC101745796_[Bombyx_mori]

FPKM:2.19 TPM:0.98

3252

A_BomaMSG_c13501_g1_i1

429bp

LOW_QUALITY_PROTEIN:_gastrula_zinc_finger_protein_XlCGF49.1_[Bombyx_mori]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005622	C	intracellular anatomical structure
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005813	C	centrosome
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding

FPKM:2.89 TPM:1.29

3253

A_BomaMSG_c13502_g1_i1

841bp

PREDICTED:_eukaryotic_translation_initiation_factor_1A,_X-chromosomal_[Papilio_polytes]

GO:0003723	F	RNA binding
GO:0003743	F	translation initiation factor activity
GO:0006412	P	translation
GO:0006413	P	translational initiation
GO:0044822	F	RNA binding

FPKM:40.24 TPM:17.98

3254

A_BomaMSG_c13503_g1_i1

353bp

hypothetical_protein_ALC57_04994_[Trachymyrmex_cornetzi]

FPKM:2.98 TPM:1.33

3255

A_BomaMSG_c13504_g1_i1

395bp

FPKM:7.14 TPM:3.19

3256

A_BomaMSG_c13505_g1_i1

607bp

beta-ureidopropionase_[Bombyx_mori]

GO:0003837	F	beta-ureidopropionase activity
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006212	P	uracil catabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0016787	F	hydrolase activity
GO:0016810	F	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0019483	P	beta-alanine biosynthetic process
GO:0043562	P	cellular response to nitrogen levels

FPKM:2.80 TPM:1.25

3257

A_BomaMSG_c13506_g1_i1

372bp

ATP-dependent_helicase_[Bombyx_mori]

FPKM:1.21 TPM:0.54

3258

A_BomaMSG_c13508_g1_i1

301bp

zinc_finger_protein_511_[Bombyx_mori]

FPKM:3.59 TPM:1.60

3259

A_BomaMSG_c13508_g1_i2

309bp

zinc_finger_protein_511_[Bombyx_mori]

FPKM:0.81 TPM:0.36

3260

A_BomaMSG_c13509_g1_i1

451bp

unconventional_myosin-Va_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003774	F	cytoskeletal motor activity
GO:0003779	F	actin binding
GO:0003824	F	catalytic activity
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005903	C	brush border
GO:0006810	P	transport
GO:0008152	P	metabolic process
GO:0015031	P	protein transport
GO:0016192	P	vesicle-mediated transport
GO:0016459	C	myosin complex
GO:0017137	F	small GTPase binding
GO:0032439	P	endosomal transport
GO:0043234	C	protein-containing complex
GO:0045179	C	apical cortex
GO:0070062	C	extracellular exosome

FPKM:0.63 TPM:0.28

3261

A_BomaMSG_c13509_g1_i2

529bp

unconventional_myosin-Va_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0000146	F	microfilament motor activity
GO:0000166	F	nucleotide binding
GO:0003774	F	cytoskeletal motor activity
GO:0003779	F	actin binding
GO:0005515	F	protein binding
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005794	C	Golgi apparatus
GO:0008152	P	metabolic process
GO:0016020	C	membrane
GO:0016192	P	vesicle-mediated transport
GO:0016459	C	myosin complex
GO:0031941	C	filamentous actin
GO:0032593	C	insulin-responsive compartment
GO:0032869	P	cellular response to insulin stimulus
GO:0060001	F	minus-end directed microfilament motor activity
GO:0072659	P	protein localization to plasma membrane

FPKM:2.52 TPM:1.13

3262

A_BomaMSG_c1350_g1_i1

527bp

protein_penguin_[Bombyx_mori]

GO:0003677	F	DNA binding
GO:0003723	F	RNA binding
GO:0003729	F	mRNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005730	C	nucleolus
GO:0005783	C	endoplasmic reticulum
GO:0006417	P	regulation of translation
GO:0010835	P	regulation of protein ADP-ribosylation
GO:0044822	F	RNA binding