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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

3121

A_BomaMSG_c13376_g1_i1

492bp

protein_star_[Bombyx_mori]

FPKM:3.34 TPM:1.49

3122

A_BomaMSG_c13377_g1_i1

634bp

FPKM:8.48 TPM:3.79

3123

A_BomaMSG_c13378_g1_i1

333bp

probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Bombyx_mori]

GO:0000062	F	fatty-acyl-CoA binding
GO:0003995	F	acyl-CoA dehydrogenase activity
GO:0003997	F	acyl-CoA oxidase activity
GO:0005777	C	peroxisome
GO:0006091	P	generation of precursor metabolites and energy
GO:0006629	P	lipid metabolic process
GO:0006631	P	fatty acid metabolic process
GO:0006635	P	fatty acid beta-oxidation
GO:0006693	P	prostaglandin metabolic process
GO:0008152	P	metabolic process
GO:0009055	F	electron transfer activity
GO:0016491	F	oxidoreductase activity
GO:0016627	F	oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395	P	fatty acid oxidation
GO:0033539	P	fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540	P	fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660	F	flavin adenine dinucleotide binding
GO:0052890	F	oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088	P	lipid homeostasis
GO:0055114	P	obsolete oxidation-reduction process

FPKM:2.57 TPM:1.15

3124

A_BomaMSG_c13379_g1_i1

249bp

putative_steroid_receptor-interacting_snf2_domain_protein_[Danaus_plexippus_plexippus]

FPKM:2.02 TPM:0.90

3125

A_BomaMSG_c1337_g1_i1

849bp

uncharacterized_protein_LOC101741653_[Bombyx_mori]

GO:0004197	F	cysteine-type endopeptidase activity
GO:0005615	C	extracellular space
GO:0005764	C	lysosome
GO:0006508	P	proteolysis
GO:0008233	F	peptidase activity
GO:0008234	F	cysteine-type peptidase activity
GO:0016787	F	hydrolase activity
GO:0051603	P	proteolysis involved in cellular protein catabolic process

FPKM:1.54 TPM:0.69

3126

A_BomaMSG_c13383_g1_i1

894bp

Uncharacterized_protein_OBRU01_01299_[Operophtera_brumata]

FPKM:5.61 TPM:2.51

3127

A_BomaMSG_c13384_g1_i1

255bp

FPKM:4.45 TPM:1.99

3128

A_BomaMSG_c13385_g1_i1

585bp

FPKM:2.32 TPM:1.04

3129

A_BomaMSG_c13386_g1_i1

425bp

vacuolar_protein_sorting-associated_protein_51_homolog_[Bombyx_mori]

GO:0000938	C	GARP complex
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0006810	P	transport
GO:0006869	P	lipid transport
GO:0007030	P	Golgi organization
GO:0010517	P	regulation of phospholipase activity
GO:0015031	P	protein transport
GO:0030306	F	small GTPase binding
GO:0032456	P	endocytic recycling
GO:0044241	P	lipid digestion
GO:0048193	P	Golgi vesicle transport
GO:0055037	C	recycling endosome
GO:1990745	C	EARP complex

FPKM:0.00 TPM:0.00

3130

A_BomaMSG_c13386_g1_i2

949bp

vacuolar_protein_sorting-associated_protein_51_homolog_[Bombyx_mori]

GO:0000938	C	GARP complex
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0006810	P	transport
GO:0006869	P	lipid transport
GO:0015031	P	protein transport
GO:0032456	P	endocytic recycling
GO:0055037	C	recycling endosome
GO:1990745	C	EARP complex

FPKM:3.29 TPM:1.47

3131

A_BomaMSG_c13388_g1_i1

433bp

gastrulation_defective_protein_1_homolog_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0022008	P	neurogenesis

FPKM:3.80 TPM:1.70

3132

A_BomaMSG_c13389_g1_i1

851bp

FPKM:31.61 TPM:14.12

3133

A_BomaMSG_c1338_g1_i1

597bp

feline_leukemia_virus_subgroup_C_receptor-related_protein_2_[Bombyx_mori]

GO:0005886	C	plasma membrane
GO:0006810	P	transport
GO:0015232	F	heme transmembrane transporter activity
GO:0015886	P	heme transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0020037	F	heme binding
GO:0055085	P	transmembrane transport

FPKM:6.78 TPM:3.03

3134

A_BomaMSG_c13390_g1_i1

477bp

FPKM:2.68 TPM:1.20

3135

A_BomaMSG_c13391_g1_i1

539bp

mitochondrial_import_inner_membrane_translocase_subunit_TIM44_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0005524	F	ATP binding
GO:0005739	C	mitochondrion
GO:0005743	C	mitochondrial inner membrane
GO:0005759	C	mitochondrial matrix
GO:0006810	P	transport
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0030150	P	protein import into mitochondrial matrix
GO:0051087	F	chaperone binding

FPKM:4.33 TPM:1.93

3136

A_BomaMSG_c13392_g1_i1

366bp

tigger_transposable_element-derived_protein_4_[Bombyx_mori]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding

FPKM:7.16 TPM:3.20

3137

A_BomaMSG_c13393_g1_i1

680bp

uncharacterized_protein_LOC101741081_[Bombyx_mori]

GO:0003993	F	acid phosphatase activity
GO:0006007	P	glucose catabolic process
GO:0008877	F	glucose-1-phosphatase activity
GO:0016158	F	3-phytase activity
GO:0016311	P	dephosphorylation
GO:0016787	F	hydrolase activity
GO:0030288	C	outer membrane-bounded periplasmic space
GO:0042597	C	periplasmic space

FPKM:2.67 TPM:1.19

3138

A_BomaMSG_c13394_g1_i1

1707bp

AP-1_complex_subunit_mu-1_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0005515	F	protein binding
GO:0005765	C	lysosomal membrane
GO:0005794	C	Golgi apparatus
GO:0005829	C	cytosol
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016032	P	viral process
GO:0016192	P	vesicle-mediated transport
GO:0019886	P	antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030131	C	clathrin adaptor complex
GO:0030659	C	cytoplasmic vesicle membrane
GO:0030665	C	clathrin-coated vesicle membrane
GO:0030669	C	clathrin-coated endocytic vesicle membrane
GO:0031410	C	cytoplasmic vesicle
GO:0032438	P	melanosome organization
GO:0032588	C	trans-Golgi network membrane
GO:0035646	P	endosome to melanosome transport
GO:0050690	P	regulation of defense response to virus by virus
GO:0070062	C	extracellular exosome