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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2941 A_BomaMSG_c13162_g1_i1
344bp
zinc_finger_protein_677_[Bombyx_mori]
FPKM:2.42 TPM:1.08
2942 A_BomaMSG_c13162_g2_i1
232bp
zinc_finger_protein_677_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0046872 F metal ion binding
GO:1990226 F histone methyltransferase binding
FPKM:4.02 TPM:1.80
2943 A_BomaMSG_c13163_g1_i1
294bp
FPKM:2.79 TPM:1.25
2944 A_BomaMSG_c13164_g1_i1
406bp
FPKM:4.99 TPM:2.23
2945 A_BomaMSG_c13165_g1_i1
408bp
FPKM:1.82 TPM:0.82
2946 A_BomaMSG_c13167_g1_i1
350bp
FPKM:5.04 TPM:2.25
2947 A_BomaMSG_c13168_g1_i1
369bp
FPKM:2.15 TPM:0.96
2948 A_BomaMSG_c1316_g1_i1
210bp
FPKM:5.35 TPM:2.39
2949 A_BomaMSG_c13170_g1_i1
238bp
FPKM:3.01 TPM:1.35
2950 A_BomaMSG_c13171_g1_i1
377bp
FPKM:4.74 TPM:2.12
2951 A_BomaMSG_c13172_g1_i1
460bp
FPKM:2.82 TPM:1.26
2952 A_BomaMSG_c13173_g1_i1
422bp
FPKM:2.47 TPM:1.11
2953 A_BomaMSG_c13175_g1_i1
512bp
FPKM:4.09 TPM:1.83
2954 A_BomaMSG_c13176_g1_i1
372bp
FPKM:2.42 TPM:1.08
2955 A_BomaMSG_c13177_g1_i1
443bp
FPKM:3.67 TPM:1.64
2956 A_BomaMSG_c13179_g1_i1
276bp
F-box_only_protein_32_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0014894 P response to denervation involved in regulation of muscle adaptation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0030018 C Z disc
GO:0071549 P cellular response to dexamethasone stimulus
FPKM:6.38 TPM:2.85
2957 A_BomaMSG_c13182_g1_i1
1064bp
FPKM:3.00 TPM:1.34
2958 A_BomaMSG_c13182_g1_i2
239bp
FPKM:0.00 TPM:0.00
2959 A_BomaMSG_c13183_g1_i1
447bp
PREDICTED:_uncharacterized_protein_LOC108252780_[Diaphorina_citri]
FPKM:0.00 TPM:0.00
2960 A_BomaMSG_c13183_g1_i2
479bp
PREDICTED:_uncharacterized_protein_LOC108252780_[Diaphorina_citri]
FPKM:2.25 TPM:1.01
2961 A_BomaMSG_c13184_g1_i1
250bp
FPKM:9.99 TPM:4.46
2962 A_BomaMSG_c13185_g1_i1
571bp
collagen_type_IV_alpha-3-binding_protein_isoform_X1_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003007 P heart morphogenesis
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006936 P muscle contraction
GO:0007029 P endoplasmic reticulum organization
GO:0007165 P signal transduction
GO:0008283 P cell population proliferation
GO:0008289 F lipid binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0034976 P response to endoplasmic reticulum stress
GO:0035620 F ceramide transfer activity
GO:0035621 P ER to Golgi ceramide transport
GO:0048471 C perinuclear region of cytoplasm
GO:0055088 P lipid homeostasis
GO:0070273 F phosphatidylinositol-4-phosphate binding
GO:0070584 P mitochondrion morphogenesis
GO:0097001 F ceramide binding
FPKM:5.44 TPM:2.43
2963 A_BomaMSG_c13186_g1_i1
461bp
FPKM:4.76 TPM:2.13
2964 A_BomaMSG_c13187_g1_i1
552bp
proton-coupled_folate_transporter_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:2.68 TPM:1.20
2965 A_BomaMSG_c13189_g1_i1
470bp
FPKM:2.52 TPM:1.13
2966 A_BomaMSG_c1318_g1_i1
680bp
FPKM:3.18 TPM:1.42
2967 A_BomaMSG_c13191_g1_i1
295bp
FPKM:3.70 TPM:1.65
2968 A_BomaMSG_c13192_g1_i1
393bp
FPKM:1.66 TPM:0.74
2969 A_BomaMSG_c13193_g1_i1
320bp
pseudouridylate_synthase_7_homolog_[Bombyx_mori]
GO:0000455 P enzyme-directed rRNA pseudouridine synthesis
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008380 P RNA splicing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0031120 P snRNA pseudouridine synthesis
GO:0042254 P ribosome biogenesis
GO:1990481 P mRNA pseudouridine synthesis
FPKM:3.56 TPM:1.59
2970 A_BomaMSG_c13194_g1_i1
318bp
FPKM:2.40 TPM:1.07
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